RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 PANK3Q9H999 370 aa22.13■■□□□ 1.13
C11orf88-202ENST00000375618 RGPD5Q99666 1765 aa22.12■■□□□ 1.13
C11orf88-202ENST00000375618 COG3Q96JB2 828 aa22.12■■□□□ 1.13
C11orf88-202ENST00000375618 LTN1O94822 1766 aa22.12■■□□□ 1.13
C11orf88-202ENST00000375618 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
C11orf88-202ENST00000375618 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
C11orf88-202ENST00000375618 ONECUT3O60422 494 aaPredicted RBP22.1■■□□□ 1.13
C11orf88-202ENST00000375618 EVA1CP58658 441 aa22.1■■□□□ 1.13
C11orf88-202ENST00000375618 CCDC7Q96M83 1385 aa22.1■■□□□ 1.13
C11orf88-202ENST00000375618 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
C11orf88-202ENST00000375618 ABCC6O95255 1503 aa22.08■■□□□ 1.13
C11orf88-202ENST00000375618 SEPT12Q8IYM1 358 aa22.08■■□□□ 1.13
C11orf88-202ENST00000375618 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.12
C11orf88-202ENST00000375618 MAP3K19Q56UN5 1328 aa22.07■■□□□ 1.12
C11orf88-202ENST00000375618 THSD7AQ9UPZ6 1657 aa22.07■■□□□ 1.12
C11orf88-202ENST00000375618 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
C11orf88-202ENST00000375618 CRB1P82279 1406 aa22.05■■□□□ 1.12
C11orf88-202ENST00000375618 CGNL1Q0VF96 1302 aa22.05■■□□□ 1.12
C11orf88-202ENST00000375618 RRS1Q15050 365 aaKnown RBP22.04■■□□□ 1.12
C11orf88-202ENST00000375618 WDR17Q8IZU2 1322 aa22.04■■□□□ 1.12
C11orf88-202ENST00000375618 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
C11orf88-202ENST00000375618 ANKRD26Q9UPS8 1709 aa22.01■■□□□ 1.11
C11orf88-202ENST00000375618 TCP11L2Q8N4U5 519 aa22.01■■□□□ 1.11
C11orf88-202ENST00000375618 IP6K1Q92551 441 aa22.01■■□□□ 1.11
C11orf88-202ENST00000375618 ERBB3P21860 1342 aa22.01■■□□□ 1.11
C11orf88-202ENST00000375618 HOXC9P31274 260 aa22■■□□□ 1.11
C11orf88-202ENST00000375618 BARGINQ6ZT62 677 aa22■■□□□ 1.11
C11orf88-202ENST00000375618 TOM1L2Q6ZVM7 507 aa22■■□□□ 1.11
C11orf88-202ENST00000375618 A0A0G2JS52 829 aa21.99■■□□□ 1.11
C11orf88-202ENST00000375618 MYT1Q01538 1121 aa21.99■■□□□ 1.11
C11orf88-202ENST00000375618 ANKRD24Q8TF21 1146 aa21.99■■□□□ 1.11
C11orf88-202ENST00000375618 UPF1Q92900 1129 aaKnown RBP eCLIP21.99■■□□□ 1.11
C11orf88-202ENST00000375618 BLMP54132 1417 aaPredicted RBP21.98■■□□□ 1.11
C11orf88-202ENST00000375618 PER1O15534 1290 aaPredicted RBP21.98■■□□□ 1.11
C11orf88-202ENST00000375618 CSB-PGBD3P0DP91 1061 aa21.98■■□□□ 1.11
C11orf88-202ENST00000375618 AMPHP49418 695 aa21.97■■□□□ 1.11
C11orf88-202ENST00000375618 AMER1Q5JTC6 1135 aaPredicted RBP21.97■■□□□ 1.11
C11orf88-202ENST00000375618 EMILIN1Q9Y6C2 1016 aa21.97■■□□□ 1.11
C11orf88-202ENST00000375618 KRT27Q7Z3Y8 459 aa21.96■■□□□ 1.11
C11orf88-202ENST00000375618 CARD10Q9BWT7 1032 aa21.96■■□□□ 1.11
C11orf88-202ENST00000375618 THRAP3Q9Y2W1 955 aaKnown RBP21.96■■□□□ 1.11
C11orf88-202ENST00000375618 WNK3Q9BYP7 1800 aa21.96■■□□□ 1.11
C11orf88-202ENST00000375618 FAM182BQ5T319 152 aa21.95■■□□□ 1.1
C11orf88-202ENST00000375618 LTV1Q96GA3 475 aaPredicted RBP21.95■■□□□ 1.1
C11orf88-202ENST00000375618 RTL1A6NKG5 1358 aa21.95■■□□□ 1.1
C11orf88-202ENST00000375618 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
C11orf88-202ENST00000375618 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
C11orf88-202ENST00000375618 KNSTRNQ9Y448 316 aa21.94■■□□□ 1.1
C11orf88-202ENST00000375618 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
C11orf88-202ENST00000375618 NSD2O96028 1365 aa21.93■■□□□ 1.1
C11orf88-202ENST00000375618 HSP90AB2PQ58FF8 381 aa21.93■■□□□ 1.1
C11orf88-202ENST00000375618 POLKQ9UBT6 870 aa21.93■■□□□ 1.1
C11orf88-202ENST00000375618 PARP4Q9UKK3 1724 aaKnown RBP21.93■■□□□ 1.1
C11orf88-202ENST00000375618 NLRP2Q9NX02 1062 aa21.92■■□□□ 1.1
C11orf88-202ENST00000375618 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
C11orf88-202ENST00000375618 EP400Q96L91 3159 aa21.91■■□□□ 1.1
C11orf88-202ENST00000375618 INSRP06213 1382 aa21.9■■□□□ 1.1
C11orf88-202ENST00000375618 FLT4P35916 1363 aa21.9■■□□□ 1.1
C11orf88-202ENST00000375618 MAP2P11137 1827 aaKnown RBP21.9■■□□□ 1.1
C11orf88-202ENST00000375618 FAM208AQ9UK61 1670 aaKnown RBP21.9■■□□□ 1.1
C11orf88-202ENST00000375618 KIF24Q5T7B8 1368 aa21.88■■□□□ 1.09
C11orf88-202ENST00000375618 MORC1Q86VD1 984 aa21.88■■□□□ 1.09
C11orf88-202ENST00000375618 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
C11orf88-202ENST00000375618 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
C11orf88-202ENST00000375618 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
C11orf88-202ENST00000375618 NBPF6Q5VWK0 638 aa21.86■■□□□ 1.09
C11orf88-202ENST00000375618 NBPF4Q96M43 638 aa21.86■■□□□ 1.09
C11orf88-202ENST00000375618 SMG6Q86US8 1419 aaKnown RBP21.86■■□□□ 1.09
C11orf88-202ENST00000375618 USHBP1Q8N6Y0 703 aa21.84■■□□□ 1.09
C11orf88-202ENST00000375618 PDE3BQ13370 1112 aa21.83■■□□□ 1.09
C11orf88-202ENST00000375618 CNGB1Q14028 1251 aaPredicted RBP21.83■■□□□ 1.09
C11orf88-202ENST00000375618 DDB1Q16531 1140 aa21.83■■□□□ 1.09
C11orf88-202ENST00000375618 NPC1L1Q9UHC9 1359 aa21.83■■□□□ 1.08
C11orf88-202ENST00000375618 IL2RBP14784 551 aa21.82■■□□□ 1.08
C11orf88-202ENST00000375618 MARCH10Q8NA82 808 aaPredicted RBP21.82■■□□□ 1.08
C11orf88-202ENST00000375618 CDCA7Q9BWT1 371 aaPredicted RBP21.82■■□□□ 1.08
C11orf88-202ENST00000375618 TNS2Q63HR2 1409 aa21.81■■□□□ 1.08
C11orf88-202ENST00000375618 MEGF6O75095 1541 aa21.81■■□□□ 1.08
C11orf88-202ENST00000375618 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
C11orf88-202ENST00000375618 NCAPD2Q15021 1401 aa21.79■■□□□ 1.08
C11orf88-202ENST00000375618 TNS1Q9HBL0 1735 aaKnown RBP21.77■■□□□ 1.08
C11orf88-202ENST00000375618 EXOC5O00471 708 aa21.77■■□□□ 1.08
C11orf88-202ENST00000375618 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
C11orf88-202ENST00000375618 EYA1Q99502 592 aa21.77■■□□□ 1.08
C11orf88-202ENST00000375618 DEFB132Q7Z7B7 95 aa21.76■■□□□ 1.07
C11orf88-202ENST00000375618 SHANK3Q9BYB0 1731 aa21.75■■□□□ 1.07
C11orf88-202ENST00000375618 OVOS2A0A0G2JMS6 1433 aa21.75■■□□□ 1.07
C11orf88-202ENST00000375618 TRIM37O94972 964 aa21.75■■□□□ 1.07
C11orf88-202ENST00000375618 PTF1AQ7RTS3 328 aa21.75■■□□□ 1.07
C11orf88-202ENST00000375618 CCDC125Q86Z20 511 aa21.75■■□□□ 1.07
C11orf88-202ENST00000375618 MTHFSP49914 203 aa21.74■■□□□ 1.07
C11orf88-202ENST00000375618 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
C11orf88-202ENST00000375618 SBF2Q86WG5 1849 aa21.72■■□□□ 1.07
C11orf88-202ENST00000375618 BCL9O00512 1426 aa21.72■■□□□ 1.07
C11orf88-202ENST00000375618 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
C11orf88-202ENST00000375618 IGSF1Q8N6C5 1336 aa21.7■■□□□ 1.06
C11orf88-202ENST00000375618 COL3A1P02461 1466 aaPredicted RBP21.7■■□□□ 1.06
C11orf88-202ENST00000375618 IL13P35225 146 aa21.69■■□□□ 1.06
C11orf88-202ENST00000375618 ZCRB1Q8TBF4 217 aaKnown RBP21.68■■□□□ 1.06
C11orf88-202ENST00000375618 DDX54Q8TDD1 881 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms