RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
SDHD-201ENST00000375549 DIAPH1O60610 1272 aaKnown RBP16.42■□□□□ 0.22
SDHD-201ENST00000375549 INSRP06213 1382 aa16.41■□□□□ 0.22
SDHD-201ENST00000375549 FLT4P35916 1363 aa16.41■□□□□ 0.22
SDHD-201ENST00000375549 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
SDHD-201ENST00000375549 ARHGEF25Q86VW2 580 aa16.41■□□□□ 0.22
SDHD-201ENST00000375549 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
SDHD-201ENST00000375549 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
SDHD-201ENST00000375549 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
SDHD-201ENST00000375549 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
SDHD-201ENST00000375549 HOXC9P31274 260 aa16.4■□□□□ 0.22
SDHD-201ENST00000375549 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
SDHD-201ENST00000375549 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
SDHD-201ENST00000375549 IP6K1Q92551 441 aa16.39■□□□□ 0.21
SDHD-201ENST00000375549 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
SDHD-201ENST00000375549 PEAK1Q9H792 1746 aa16.39■□□□□ 0.21
SDHD-201ENST00000375549 RTL1A6NKG5 1358 aa16.39■□□□□ 0.21
SDHD-201ENST00000375549 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
SDHD-201ENST00000375549 CAPN15O75808 1086 aa16.38■□□□□ 0.21
SDHD-201ENST00000375549 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
SDHD-201ENST00000375549 IL13P35225 146 aa16.37■□□□□ 0.21
SDHD-201ENST00000375549 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
SDHD-201ENST00000375549 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
SDHD-201ENST00000375549 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
SDHD-201ENST00000375549 CHRNA2Q15822 529 aa16.36■□□□□ 0.21
SDHD-201ENST00000375549 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
SDHD-201ENST00000375549 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
SDHD-201ENST00000375549 HSPA1LP34931 641 aa16.36■□□□□ 0.21
SDHD-201ENST00000375549 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
SDHD-201ENST00000375549 CPDO75976 1380 aa16.35■□□□□ 0.21
SDHD-201ENST00000375549 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
SDHD-201ENST00000375549 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
SDHD-201ENST00000375549 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
SDHD-201ENST00000375549 LTN1O94822 1766 aa16.34■□□□□ 0.21
SDHD-201ENST00000375549 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
SDHD-201ENST00000375549 JCADQ9P266 1359 aa16.34■□□□□ 0.21
SDHD-201ENST00000375549 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
SDHD-201ENST00000375549 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
SDHD-201ENST00000375549 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
SDHD-201ENST00000375549 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
SDHD-201ENST00000375549 ABCA3Q99758 1704 aa16.32■□□□□ 0.2
SDHD-201ENST00000375549 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
SDHD-201ENST00000375549 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
SDHD-201ENST00000375549 BLMP54132 1417 aaPredicted RBP16.32■□□□□ 0.2
SDHD-201ENST00000375549 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
SDHD-201ENST00000375549 HMOX1P09601 288 aa16.31■□□□□ 0.2
SDHD-201ENST00000375549 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
SDHD-201ENST00000375549 ADAMTS2O95450 1211 aa16.3■□□□□ 0.2
SDHD-201ENST00000375549 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
SDHD-201ENST00000375549 EYA1Q99502 592 aa16.29■□□□□ 0.2
SDHD-201ENST00000375549 FCHSD2O94868 740 aa16.28■□□□□ 0.2
SDHD-201ENST00000375549 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
SDHD-201ENST00000375549 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
SDHD-201ENST00000375549 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
SDHD-201ENST00000375549 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
SDHD-201ENST00000375549 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
SDHD-201ENST00000375549 ERBB3P21860 1342 aa16.27■□□□□ 0.2
SDHD-201ENST00000375549 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
SDHD-201ENST00000375549 ABCC6O95255 1503 aa16.27■□□□□ 0.2
SDHD-201ENST00000375549 PRKAR2BP31323 418 aa16.27■□□□□ 0.19
SDHD-201ENST00000375549 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.19
SDHD-201ENST00000375549 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.19
SDHD-201ENST00000375549 NBPF4Q96M43 638 aa16.27■□□□□ 0.19
SDHD-201ENST00000375549 COL18A1P39060 1754 aa16.26■□□□□ 0.19
SDHD-201ENST00000375549 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
SDHD-201ENST00000375549 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
SDHD-201ENST00000375549 SPATA31A6Q5VVP1 1343 aa16.26■□□□□ 0.19
SDHD-201ENST00000375549 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
SDHD-201ENST00000375549 CAMTA1Q9Y6Y1 1673 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 APAF1O14727 1248 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 NEFMP07197 916 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 EVA1CP58658 441 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
SDHD-201ENST00000375549 TCP11L2Q8N4U5 519 aa16.23■□□□□ 0.19
SDHD-201ENST00000375549 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
SDHD-201ENST00000375549 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
SDHD-201ENST00000375549 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
SDHD-201ENST00000375549 COL14A1Q05707 1796 aaKnown RBP16.22■□□□□ 0.19
SDHD-201ENST00000375549 FBXO41Q8TF61 875 aa16.22■□□□□ 0.19
SDHD-201ENST00000375549 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
SDHD-201ENST00000375549 RGPD5Q99666 1765 aa16.22■□□□□ 0.19
SDHD-201ENST00000375549 NEUROD2Q15784 382 aa16.21■□□□□ 0.19
SDHD-201ENST00000375549 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
SDHD-201ENST00000375549 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
SDHD-201ENST00000375549 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
SDHD-201ENST00000375549 KDRP35968 1356 aa16.21■□□□□ 0.19
SDHD-201ENST00000375549 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
SDHD-201ENST00000375549 LARP1Q6PKG0 1096 aaKnown RBP16.2■□□□□ 0.18
SDHD-201ENST00000375549 C8orf37Q96NL8 207 aa16.2■□□□□ 0.18
SDHD-201ENST00000375549 LRP6O75581 1613 aa16.2■□□□□ 0.18
SDHD-201ENST00000375549 NGLY1Q96IV0 654 aa16.19■□□□□ 0.18
SDHD-201ENST00000375549 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
SDHD-201ENST00000375549 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
SDHD-201ENST00000375549 NCAPD2Q15021 1401 aa16.17■□□□□ 0.18
SDHD-201ENST00000375549 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
SDHD-201ENST00000375549 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
SDHD-201ENST00000375549 RGPD2P0DJD1 1756 aa16.16■□□□□ 0.18
SDHD-201ENST00000375549 RIPK4P57078 832 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms