RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CASZ1Q86V15 1759 aa15.33■□□□□ 0.04
HLA-DQA1-202ENST00000374949 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQA1-202ENST00000374949 AATKQ6ZMQ8 1374 aa15.33■□□□□ 0.04
HLA-DQA1-202ENST00000374949 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
HLA-DQA1-202ENST00000374949 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
HLA-DQA1-202ENST00000374949 NLRP6P59044 892 aa15.31■□□□□ 0.04
HLA-DQA1-202ENST00000374949 CABP1Q9NZU7 370 aa15.31■□□□□ 0.04
HLA-DQA1-202ENST00000374949 PPP1R1BQ9UD71 204 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQA1-202ENST00000374949 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.04
HLA-DQA1-202ENST00000374949 DDB1Q16531 1140 aa15.29■□□□□ 0.04
HLA-DQA1-202ENST00000374949 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
HLA-DQA1-202ENST00000374949 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
HLA-DQA1-202ENST00000374949 SPON1Q9HCB6 807 aa15.29■□□□□ 0.04
HLA-DQA1-202ENST00000374949 ANO8Q9HCE9 1232 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQA1-202ENST00000374949 MYOM1P52179 1685 aa15.28■□□□□ 0.04
HLA-DQA1-202ENST00000374949 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
HLA-DQA1-202ENST00000374949 YY1P25490 414 aa15.28■□□□□ 0.04
HLA-DQA1-202ENST00000374949 NFAT5O94916 1531 aa15.27■□□□□ 0.04
HLA-DQA1-202ENST00000374949 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.04
HLA-DQA1-202ENST00000374949 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.04
HLA-DQA1-202ENST00000374949 SOX12O15370 315 aa15.27■□□□□ 0.04
HLA-DQA1-202ENST00000374949 KCNQ2O43526 872 aa15.27■□□□□ 0.04
HLA-DQA1-202ENST00000374949 AXIN2Q9Y2T1 843 aa15.27■□□□□ 0.04
HLA-DQA1-202ENST00000374949 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
HLA-DQA1-202ENST00000374949 MON2Q7Z3U7 1717 aa15.26■□□□□ 0.03
HLA-DQA1-202ENST00000374949 EVC2Q86UK5 1308 aa15.25■□□□□ 0.03
HLA-DQA1-202ENST00000374949 MARCH10Q8NA82 808 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQA1-202ENST00000374949 CARD11Q9BXL7 1154 aa15.25■□□□□ 0.03
HLA-DQA1-202ENST00000374949 PLSCR1O15162 318 aa15.24■□□□□ 0.03
HLA-DQA1-202ENST00000374949 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQA1-202ENST00000374949 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQA1-202ENST00000374949 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
HLA-DQA1-202ENST00000374949 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
HLA-DQA1-202ENST00000374949 NHSQ6T4R5 1651 aa15.23■□□□□ 0.03
HLA-DQA1-202ENST00000374949 CSB-PGBD3P0DP91 1061 aa15.23■□□□□ 0.03
HLA-DQA1-202ENST00000374949 BCL9O00512 1426 aa15.23■□□□□ 0.03
HLA-DQA1-202ENST00000374949 ABCC6O95255 1503 aa15.22■□□□□ 0.03
HLA-DQA1-202ENST00000374949 ARHGEF25Q86VW2 580 aa15.22■□□□□ 0.03
HLA-DQA1-202ENST00000374949 TNS2Q63HR2 1409 aa15.22■□□□□ 0.03
HLA-DQA1-202ENST00000374949 USP54Q70EL1 1684 aa15.22■□□□□ 0.03
HLA-DQA1-202ENST00000374949 LTN1O94822 1766 aa15.21■□□□□ 0.03
HLA-DQA1-202ENST00000374949 ZBTB7AO95365 584 aa15.21■□□□□ 0.03
HLA-DQA1-202ENST00000374949 PROM2Q8N271 834 aa15.21■□□□□ 0.03
HLA-DQA1-202ENST00000374949 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQA1-202ENST00000374949 KCNH5Q8NCM2 988 aa15.2■□□□□ 0.02
HLA-DQA1-202ENST00000374949 CARD10Q9BWT7 1032 aa15.2■□□□□ 0.02
HLA-DQA1-202ENST00000374949 KTN1Q86UP2 1357 aaKnown RBP15.2■□□□□ 0.02
HLA-DQA1-202ENST00000374949 TTC21AQ8NDW8 1320 aa15.19■□□□□ 0.02
HLA-DQA1-202ENST00000374949 PAPPAQ13219 1627 aa15.19■□□□□ 0.02
HLA-DQA1-202ENST00000374949 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
HLA-DQA1-202ENST00000374949 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
HLA-DQA1-202ENST00000374949 DIEXFQ68CQ4 756 aaKnown RBP15.18■□□□□ 0.02
HLA-DQA1-202ENST00000374949 USP47Q96K76 1375 aa15.18■□□□□ 0.02
HLA-DQA1-202ENST00000374949 CCDC7Q96M83 1385 aa15.18■□□□□ 0.02
HLA-DQA1-202ENST00000374949 BTAF1O14981 1849 aa15.17■□□□□ 0.02
HLA-DQA1-202ENST00000374949 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQA1-202ENST00000374949 STK32BQ9NY57 414 aa15.17■□□□□ 0.02
HLA-DQA1-202ENST00000374949 PTGER2P43116 358 aa15.16■□□□□ 0.02
HLA-DQA1-202ENST00000374949 ATF5Q9Y2D1 282 aaPredicted RBP15.16■□□□□ 0.02
HLA-DQA1-202ENST00000374949 CD163L1Q9NR16 1453 aa15.15■□□□□ 0.02
HLA-DQA1-202ENST00000374949 EXOC5O00471 708 aa15.15■□□□□ 0.02
HLA-DQA1-202ENST00000374949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
HLA-DQA1-202ENST00000374949 ST20-MTHFSA0A0A6YYL1 179 aa15.14■□□□□ 0.01
HLA-DQA1-202ENST00000374949 SLC15A2Q16348 729 aa15.14■□□□□ 0.01
HLA-DQA1-202ENST00000374949 ACSBG1Q96GR2 724 aa15.14■□□□□ 0.01
HLA-DQA1-202ENST00000374949 ERBB3P21860 1342 aa15.14■□□□□ 0.01
HLA-DQA1-202ENST00000374949 NME9Q86XW9 330 aa15.13■□□□□ 0.01
HLA-DQA1-202ENST00000374949 USP31Q70CQ4 1352 aa15.12■□□□□ 0.01
HLA-DQA1-202ENST00000374949 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
HLA-DQA1-202ENST00000374949 FHDC1Q9C0D6 1143 aaPredicted RBP15.12■□□□□ 0.01
HLA-DQA1-202ENST00000374949 NLRP2Q9NX02 1062 aa15.12■□□□□ 0.01
HLA-DQA1-202ENST00000374949 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
HLA-DQA1-202ENST00000374949 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
HLA-DQA1-202ENST00000374949 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
HLA-DQA1-202ENST00000374949 DDX10Q13206 875 aaKnown RBP15.1■□□□□ 0.01
HLA-DQA1-202ENST00000374949 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
HLA-DQA1-202ENST00000374949 CHD4Q14839 1912 aa15.09■□□□□ 0.01
HLA-DQA1-202ENST00000374949 DOT1LQ8TEK3 1739 aa15.09■□□□□ 0.01
HLA-DQA1-202ENST00000374949 IL2RBP14784 551 aa15.09■□□□□ 0.01
HLA-DQA1-202ENST00000374949 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
HLA-DQA1-202ENST00000374949 SYT17Q9BSW7 474 aa15.09■□□□□ 0.01
HLA-DQA1-202ENST00000374949 UTRNP46939 3433 aa15.08■□□□□ 0.01
HLA-DQA1-202ENST00000374949 ZNF827Q17R98 1081 aa15.08■□□□□ 0
HLA-DQA1-202ENST00000374949 TMC1Q8TDI8 760 aa15.08■□□□□ 0
HLA-DQA1-202ENST00000374949 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
HLA-DQA1-202ENST00000374949 WASHC2AQ641Q2 1341 aa15.08■□□□□ 0
HLA-DQA1-202ENST00000374949 QSER1Q2KHR3 1735 aa15.08■□□□□ 0
HLA-DQA1-202ENST00000374949 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0
HLA-DQA1-202ENST00000374949 SLC24A1O60721 1099 aa15.07■□□□□ 0
HLA-DQA1-202ENST00000374949 ZNF784Q8NCA9 323 aaPredicted RBP15.07■□□□□ 0
HLA-DQA1-202ENST00000374949 A0A1W2PP64 1363 aa15.07■□□□□ 0
HLA-DQA1-202ENST00000374949 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
HLA-DQA1-202ENST00000374949 RGPD2P0DJD1 1756 aa15.06■□□□□ 0
HLA-DQA1-202ENST00000374949 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ -0
HLA-DQA1-202ENST00000374949 ARXQ96QS3 562 aa15.05■□□□□ -0
HLA-DQA1-202ENST00000374949 SLC12A5Q9H2X9 1139 aa15.05■□□□□ -0
HLA-DQA1-202ENST00000374949 LRRC4BQ9NT99 713 aa15.05■□□□□ -0
HLA-DQA1-202ENST00000374949 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
HLA-DQA1-202ENST00000374949 TMF1P82094 1093 aa15.04■□□□□ -0
HLA-DQA1-202ENST00000374949 TESK2Q96S53 571 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms