RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
SP140-202ENST00000373645 LRRC37A3O60309 1634 aa11.03□□□□□ -0.64
SP140-202ENST00000373645 EVA1CP58658 441 aa11.03□□□□□ -0.64
SP140-202ENST00000373645 NBPF8Q3BBV2 869 aa11.03□□□□□ -0.64
SP140-202ENST00000373645 PDGFDQ9GZP0 370 aaPredicted RBP11.03□□□□□ -0.64
SP140-202ENST00000373645 CPDO75976 1380 aa11.03□□□□□ -0.64
SP140-202ENST00000373645 TONSLQ96HA7 1378 aa11.02□□□□□ -0.65
SP140-202ENST00000373645 CASZ1Q86V15 1759 aa11.01□□□□□ -0.65
SP140-202ENST00000373645 ABTB2Q8N961 1025 aa11.01□□□□□ -0.65
SP140-202ENST00000373645 SBF2Q86WG5 1849 aa11□□□□□ -0.65
SP140-202ENST00000373645 ZBTB7CA1YPR0 619 aa11□□□□□ -0.65
SP140-202ENST00000373645 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
SP140-202ENST00000373645 SPON1Q9HCB6 807 aa11□□□□□ -0.65
SP140-202ENST00000373645 PPP1R1BQ9UD71 204 aaPredicted RBP11□□□□□ -0.65
SP140-202ENST00000373645 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
SP140-202ENST00000373645 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 KCNQ2O43526 872 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 GCP02774 474 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 NBPF1Q3BBV0 1214 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 NBPF14Q5TI25 921 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 OVOS2A0A0G2JMS6 1433 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 OVOS2A0A0J9YW53 1432 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 CRB1P82279 1406 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 OVOS2Q6IE36 1432 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 PPIP5K1Q6PFW1 1433 aa10.99□□□□□ -0.65
SP140-202ENST00000373645 MYOM1P52179 1685 aa10.98□□□□□ -0.65
SP140-202ENST00000373645 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
SP140-202ENST00000373645 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
SP140-202ENST00000373645 RGPD3A6NKT7 1758 aaPredicted RBP10.98□□□□□ -0.65
SP140-202ENST00000373645 RGPD4Q7Z3J3 1758 aa10.98□□□□□ -0.65
SP140-202ENST00000373645 WNK3Q9BYP7 1800 aa10.98□□□□□ -0.65
SP140-202ENST00000373645 PROM2Q8N271 834 aa10.97□□□□□ -0.65
SP140-202ENST00000373645 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
SP140-202ENST00000373645 SLIT3O75094 1523 aa10.97□□□□□ -0.65
SP140-202ENST00000373645 PIK3C2AO00443 1686 aa10.97□□□□□ -0.65
SP140-202ENST00000373645 COL18A1P39060 1754 aa10.97□□□□□ -0.65
SP140-202ENST00000373645 USP6P35125 1406 aa10.96□□□□□ -0.65
SP140-202ENST00000373645 ZBTB7AO95365 584 aa10.96□□□□□ -0.65
SP140-202ENST00000373645 SRPK2P78362 688 aaKnown RBP10.96□□□□□ -0.65
SP140-202ENST00000373645 THRAP3Q9Y2W1 955 aaKnown RBP10.96□□□□□ -0.65
SP140-202ENST00000373645 AATKQ6ZMQ8 1374 aa10.95□□□□□ -0.66
SP140-202ENST00000373645 PTGER2P43116 358 aa10.95□□□□□ -0.66
SP140-202ENST00000373645 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
SP140-202ENST00000373645 MARCH10Q8NA82 808 aaPredicted RBP10.95□□□□□ -0.66
SP140-202ENST00000373645 AXIN2Q9Y2T1 843 aa10.95□□□□□ -0.66
SP140-202ENST00000373645 QRICH2Q9H0J4 1663 aa10.95□□□□□ -0.66
SP140-202ENST00000373645 UTRNP46939 3433 aa10.94□□□□□ -0.66
SP140-202ENST00000373645 DDB1Q16531 1140 aa10.94□□□□□ -0.66
SP140-202ENST00000373645 RGPD5Q99666 1765 aa10.94□□□□□ -0.66
SP140-202ENST00000373645 KIAA1210Q9ULL0 1709 aa10.94□□□□□ -0.66
SP140-202ENST00000373645 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
SP140-202ENST00000373645 NLRP6P59044 892 aa10.93□□□□□ -0.66
SP140-202ENST00000373645 TOM1L2Q6ZVM7 507 aa10.93□□□□□ -0.66
SP140-202ENST00000373645 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
SP140-202ENST00000373645 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
SP140-202ENST00000373645 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
SP140-202ENST00000373645 CENPJQ9HC77 1338 aaPredicted RBP10.92□□□□□ -0.66
SP140-202ENST00000373645 PLSCR1O15162 318 aa10.92□□□□□ -0.66
SP140-202ENST00000373645 SOX12O15370 315 aa10.92□□□□□ -0.66
SP140-202ENST00000373645 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
SP140-202ENST00000373645 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
SP140-202ENST00000373645 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
SP140-202ENST00000373645 NFAT5O94916 1531 aa10.9□□□□□ -0.66
SP140-202ENST00000373645 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
SP140-202ENST00000373645 FHDC1Q9C0D6 1143 aaPredicted RBP10.9□□□□□ -0.66
SP140-202ENST00000373645 BCL9O00512 1426 aa10.9□□□□□ -0.66
SP140-202ENST00000373645 EVX2Q03828 476 aa10.89□□□□□ -0.67
SP140-202ENST00000373645 ARHGEF25Q86VW2 580 aa10.89□□□□□ -0.67
SP140-202ENST00000373645 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
SP140-202ENST00000373645 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
SP140-202ENST00000373645 TNS2Q63HR2 1409 aa10.88□□□□□ -0.67
SP140-202ENST00000373645 SYT17Q9BSW7 474 aa10.88□□□□□ -0.67
SP140-202ENST00000373645 BRD4O60885 1362 aaPredicted RBP10.88□□□□□ -0.67
SP140-202ENST00000373645 TRPM1Q7Z4N2 1603 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 TTC21BQ7Z4L5 1316 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 C11orf95C9JLR9 678 aaPredicted RBP10.87□□□□□ -0.67
SP140-202ENST00000373645 CSB-PGBD3P0DP91 1061 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 SLC15A2Q16348 729 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 NHSQ6T4R5 1651 aa10.87□□□□□ -0.67
SP140-202ENST00000373645 ZNF827Q17R98 1081 aa10.86□□□□□ -0.67
SP140-202ENST00000373645 CARD10Q9BWT7 1032 aa10.86□□□□□ -0.67
SP140-202ENST00000373645 ABCC6O95255 1503 aa10.85□□□□□ -0.67
SP140-202ENST00000373645 MTFR1LQ9H019 292 aa10.85□□□□□ -0.67
SP140-202ENST00000373645 BTAF1O14981 1849 aa10.84□□□□□ -0.67
SP140-202ENST00000373645 CDCA7Q9BWT1 371 aaPredicted RBP10.84□□□□□ -0.67
SP140-202ENST00000373645 CHD4Q14839 1912 aa10.84□□□□□ -0.67
SP140-202ENST00000373645 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
SP140-202ENST00000373645 LRRC4BQ9NT99 713 aa10.83□□□□□ -0.68
SP140-202ENST00000373645 EVC2Q86UK5 1308 aa10.83□□□□□ -0.68
SP140-202ENST00000373645 CCDC7Q96M83 1385 aa10.82□□□□□ -0.68
SP140-202ENST00000373645 MON2Q7Z3U7 1717 aa10.82□□□□□ -0.68
SP140-202ENST00000373645 KAT6BQ8WYB5 2073 aa10.82□□□□□ -0.68
SP140-202ENST00000373645 EXOC5O00471 708 aa10.82□□□□□ -0.68
SP140-202ENST00000373645 ERBB3P21860 1342 aa10.82□□□□□ -0.68
SP140-202ENST00000373645 KCNQ4P56696 695 aa10.81□□□□□ -0.68
SP140-202ENST00000373645 NME9Q86XW9 330 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms