RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
C9orf78-201ENST00000372447 POLKQ9UBT6 870 aa21.42■■□□□ 1.02
C9orf78-201ENST00000372447 EMILIN1Q9Y6C2 1016 aa21.41■■□□□ 1.02
C9orf78-201ENST00000372447 NGLY1Q96IV0 654 aa21.41■■□□□ 1.02
C9orf78-201ENST00000372447 AXIN2Q9Y2T1 843 aa21.4■■□□□ 1.02
C9orf78-201ENST00000372447 PPM1GO15355 546 aaPredicted RBP21.38■■□□□ 1.01
C9orf78-201ENST00000372447 AMPHP49418 695 aa21.38■■□□□ 1.01
C9orf78-201ENST00000372447 FNBP4Q8N3X1 1017 aaPredicted RBP21.37■■□□□ 1.01
C9orf78-201ENST00000372447 IP6K1Q92551 441 aa21.37■■□□□ 1.01
C9orf78-201ENST00000372447 BTG4Q9NY30 223 aa21.37■■□□□ 1.01
C9orf78-201ENST00000372447 HOXC9P31274 260 aa21.36■■□□□ 1.01
C9orf78-201ENST00000372447 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
C9orf78-201ENST00000372447 MAP2P11137 1827 aaKnown RBP21.35■■□□□ 1.01
C9orf78-201ENST00000372447 LTN1O94822 1766 aa21.35■■□□□ 1.01
C9orf78-201ENST00000372447 SLIT2O94813 1529 aa21.35■■□□□ 1.01
C9orf78-201ENST00000372447 MTHFSP49914 203 aa21.35■■□□□ 1.01
C9orf78-201ENST00000372447 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
C9orf78-201ENST00000372447 AFF2P51816 1311 aa21.34■■□□□ 1.01
C9orf78-201ENST00000372447 HSP90AB2PQ58FF8 381 aa21.34■■□□□ 1.01
C9orf78-201ENST00000372447 COL18A1P39060 1754 aa21.34■■□□□ 1.01
C9orf78-201ENST00000372447 COL14A1Q05707 1796 aaKnown RBP21.34■■□□□ 1.01
C9orf78-201ENST00000372447 LMO7Q8WWI1 1683 aa21.33■■□□□ 1.01
C9orf78-201ENST00000372447 FLT4P35916 1363 aa21.33■■□□□ 1
C9orf78-201ENST00000372447 KIF24Q5T7B8 1368 aa21.33■■□□□ 1
C9orf78-201ENST00000372447 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
C9orf78-201ENST00000372447 PEAK1Q9H792 1746 aa21.32■■□□□ 1
C9orf78-201ENST00000372447 RTL1A6NKG5 1358 aa21.32■■□□□ 1
C9orf78-201ENST00000372447 USP21Q9UK80 565 aa21.32■■□□□ 1
C9orf78-201ENST00000372447 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
C9orf78-201ENST00000372447 UNC5CLQ8IV45 518 aa21.31■■□□□ 1
C9orf78-201ENST00000372447 PLCH1Q4KWH8 1693 aa21.3■■□□□ 1
C9orf78-201ENST00000372447 STRN4Q9NRL3 753 aa21.3■■□□□ 1
C9orf78-201ENST00000372447 ABCC6O95255 1503 aa21.3■■□□□ 1
C9orf78-201ENST00000372447 INSRP06213 1382 aa21.29■■□□□ 1
C9orf78-201ENST00000372447 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
C9orf78-201ENST00000372447 EVA1CP58658 441 aa21.29■■□□□ 1
C9orf78-201ENST00000372447 COL5A2P05997 1499 aaPredicted RBP21.28■■□□□ 1
C9orf78-201ENST00000372447 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
C9orf78-201ENST00000372447 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
C9orf78-201ENST00000372447 RGS17Q9UGC6 210 aaPredicted RBP21.28■■□□□ 1
C9orf78-201ENST00000372447 RGPD5Q99666 1765 aa21.28■■□□□ 1
C9orf78-201ENST00000372447 ERBB3P21860 1342 aa21.28■■□□□ 1
C9orf78-201ENST00000372447 LARP1Q6PKG0 1096 aaKnown RBP21.27■■□□□ 1
C9orf78-201ENST00000372447 CDK12Q9NYV4 1490 aaPredicted RBP21.27■□□□□ 0.99
C9orf78-201ENST00000372447 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
C9orf78-201ENST00000372447 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
C9orf78-201ENST00000372447 ZNF772Q68DY9 489 aaPredicted RBP21.25■□□□□ 0.99
C9orf78-201ENST00000372447 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
C9orf78-201ENST00000372447 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
C9orf78-201ENST00000372447 WDR17Q8IZU2 1322 aa21.25■□□□□ 0.99
C9orf78-201ENST00000372447 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
C9orf78-201ENST00000372447 EIF4A2Q14240 407 aaKnown RBP21.24■□□□□ 0.99
C9orf78-201ENST00000372447 QTRT2Q9H974 415 aaKnown RBP21.24■□□□□ 0.99
C9orf78-201ENST00000372447 NRAPQ86VF7 1730 aa21.24■□□□□ 0.99
C9orf78-201ENST00000372447 VPS72Q15906 364 aa21.23■□□□□ 0.99
C9orf78-201ENST00000372447 TOM1L2Q6ZVM7 507 aa21.23■□□□□ 0.99
C9orf78-201ENST00000372447 TRPC5Q9UL62 973 aaPredicted RBP21.23■□□□□ 0.99
C9orf78-201ENST00000372447 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
C9orf78-201ENST00000372447 IL13P35225 146 aa21.21■□□□□ 0.99
C9orf78-201ENST00000372447 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
C9orf78-201ENST00000372447 NLRP2Q9NX02 1062 aa21.21■□□□□ 0.99
C9orf78-201ENST00000372447 CCDC9Q9Y3X0 531 aaKnown RBP21.21■□□□□ 0.99
C9orf78-201ENST00000372447 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.99
C9orf78-201ENST00000372447 NBPF4Q96M43 638 aa21.2■□□□□ 0.99
C9orf78-201ENST00000372447 USP35Q9P2H5 1018 aa21.2■□□□□ 0.99
C9orf78-201ENST00000372447 ATRNO75882 1429 aa21.2■□□□□ 0.98
C9orf78-201ENST00000372447 CRB1P82279 1406 aa21.2■□□□□ 0.98
C9orf78-201ENST00000372447 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.2■□□□□ 0.98
C9orf78-201ENST00000372447 SPATA31A5Q5VU36 1347 aa21.2■□□□□ 0.98
C9orf78-201ENST00000372447 SPATA31A7Q8IWB4 1347 aa21.2■□□□□ 0.98
C9orf78-201ENST00000372447 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
C9orf78-201ENST00000372447 COL3A1P02461 1466 aaPredicted RBP21.19■□□□□ 0.98
C9orf78-201ENST00000372447 POTEAQ6S8J7 498 aa21.19■□□□□ 0.98
C9orf78-201ENST00000372447 EYA1Q99502 592 aa21.19■□□□□ 0.98
C9orf78-201ENST00000372447 SPATA31A1Q5TZJ5 1347 aa21.19■□□□□ 0.98
C9orf78-201ENST00000372447 GJD4Q96KN9 370 aaPredicted RBP21.18■□□□□ 0.98
C9orf78-201ENST00000372447 CARD10Q9BWT7 1032 aa21.18■□□□□ 0.98
C9orf78-201ENST00000372447 ERICH6BQ5W0A0 696 aa21.18■□□□□ 0.98
C9orf78-201ENST00000372447 IRX6P78412 446 aaPredicted RBP21.17■□□□□ 0.98
C9orf78-201ENST00000372447 USHBP1Q8N6Y0 703 aa21.17■□□□□ 0.98
C9orf78-201ENST00000372447 ADAMTS8Q9UP79 889 aa21.15■□□□□ 0.98
C9orf78-201ENST00000372447 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
C9orf78-201ENST00000372447 WDR43Q15061 677 aaKnown RBP eCLIP21.15■□□□□ 0.98
C9orf78-201ENST00000372447 TCP11L2Q8N4U5 519 aa21.15■□□□□ 0.98
C9orf78-201ENST00000372447 IGSF1Q8N6C5 1336 aa21.14■□□□□ 0.97
C9orf78-201ENST00000372447 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
C9orf78-201ENST00000372447 U2SURPO15042 1029 aaKnown RBP21.13■□□□□ 0.97
C9orf78-201ENST00000372447 RBM6P78332 1123 aaKnown RBP21.13■□□□□ 0.97
C9orf78-201ENST00000372447 THRAP3Q9Y2W1 955 aaKnown RBP21.13■□□□□ 0.97
C9orf78-201ENST00000372447 GLI3P10071 1580 aa21.12■□□□□ 0.97
C9orf78-201ENST00000372447 RXRBP28702 533 aa21.12■□□□□ 0.97
C9orf78-201ENST00000372447 FAM98CQ17RN3 349 aaKnown RBP21.12■□□□□ 0.97
C9orf78-201ENST00000372447 SALL2Q9Y467 1007 aaPredicted RBP21.12■□□□□ 0.97
C9orf78-201ENST00000372447 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
C9orf78-201ENST00000372447 BARGINQ6ZT62 677 aa21.11■□□□□ 0.97
C9orf78-201ENST00000372447 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
C9orf78-201ENST00000372447 NCAPD2Q15021 1401 aa21.1■□□□□ 0.97
C9orf78-201ENST00000372447 SULT6B1Q6IMI4 303 aa21.1■□□□□ 0.97
C9orf78-201ENST00000372447 RNF123Q5XPI4 1314 aa21.1■□□□□ 0.97
C9orf78-201ENST00000372447 ONECUT3O60422 494 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms