RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 COL18A1P39060 1754 aa28.52■■■□□ 2.16
CD58-201ENST00000369487 COL5A2P05997 1499 aaPredicted RBP28.52■■■□□ 2.16
CD58-201ENST00000369487 SPATA31A5Q5VU36 1347 aa28.49■■■□□ 2.15
CD58-201ENST00000369487 SPATA31A7Q8IWB4 1347 aa28.49■■■□□ 2.15
CD58-201ENST00000369487 WASHC2AQ641Q2 1341 aa28.48■■■□□ 2.15
CD58-201ENST00000369487 LTN1O94822 1766 aa28.48■■■□□ 2.15
CD58-201ENST00000369487 SPATA31A1Q5TZJ5 1347 aa28.45■■■□□ 2.15
CD58-201ENST00000369487 AXIN2Q9Y2T1 843 aa28.45■■■□□ 2.14
CD58-201ENST00000369487 LARP1Q6PKG0 1096 aaKnown RBP28.44■■■□□ 2.14
CD58-201ENST00000369487 NSD2O96028 1365 aa28.43■■■□□ 2.14
CD58-201ENST00000369487 ONECUT3O60422 494 aaPredicted RBP28.43■■■□□ 2.14
CD58-201ENST00000369487 KNSTRNQ9Y448 316 aa28.43■■■□□ 2.14
CD58-201ENST00000369487 CRB1P82279 1406 aa28.43■■■□□ 2.14
CD58-201ENST00000369487 WDR17Q8IZU2 1322 aa28.42■■■□□ 2.14
CD58-201ENST00000369487 ANKRD26Q9UPS8 1709 aa28.41■■■□□ 2.14
CD58-201ENST00000369487 RGPD5Q99666 1765 aa28.41■■■□□ 2.14
CD58-201ENST00000369487 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
CD58-201ENST00000369487 MAP3K19Q56UN5 1328 aa28.41■■■□□ 2.14
CD58-201ENST00000369487 FAM98CQ17RN3 349 aaKnown RBP28.4■■■□□ 2.14
CD58-201ENST00000369487 RTL1A6NKG5 1358 aa28.39■■■□□ 2.14
CD58-201ENST00000369487 SEPT12Q8IYM1 358 aa28.39■■■□□ 2.14
CD58-201ENST00000369487 IP6K1Q92551 441 aa28.39■■■□□ 2.14
CD58-201ENST00000369487 CSB-PGBD3P0DP91 1061 aa28.38■■■□□ 2.13
CD58-201ENST00000369487 TOM1L2Q6ZVM7 507 aa28.38■■■□□ 2.13
CD58-201ENST00000369487 USP35Q9P2H5 1018 aa28.38■■■□□ 2.13
CD58-201ENST00000369487 THRAP3Q9Y2W1 955 aaKnown RBP28.38■■■□□ 2.13
CD58-201ENST00000369487 A0A0G2JS52 829 aa28.37■■■□□ 2.13
CD58-201ENST00000369487 AMPHP49418 695 aa28.37■■■□□ 2.13
CD58-201ENST00000369487 MYT1Q01538 1121 aa28.37■■■□□ 2.13
CD58-201ENST00000369487 TCP11L2Q8N4U5 519 aa28.37■■■□□ 2.13
CD58-201ENST00000369487 ERBB3P21860 1342 aa28.37■■■□□ 2.13
CD58-201ENST00000369487 FBLN1P23142 703 aa28.36■■■□□ 2.13
CD58-201ENST00000369487 BARGINQ6ZT62 677 aa28.36■■■□□ 2.13
CD58-201ENST00000369487 KIF24Q5T7B8 1368 aa28.36■■■□□ 2.13
CD58-201ENST00000369487 RRS1Q15050 365 aaKnown RBP28.35■■■□□ 2.13
CD58-201ENST00000369487 THSD7AQ9UPZ6 1657 aa28.35■■■□□ 2.13
CD58-201ENST00000369487 HOXC9P31274 260 aa28.34■■■□□ 2.13
CD58-201ENST00000369487 ANKRD24Q8TF21 1146 aa28.33■■■□□ 2.13
CD58-201ENST00000369487 PER1O15534 1290 aaPredicted RBP28.32■■■□□ 2.12
CD58-201ENST00000369487 CARD10Q9BWT7 1032 aa28.32■■■□□ 2.12
CD58-201ENST00000369487 AMER1Q5JTC6 1135 aaPredicted RBP28.31■■■□□ 2.12
CD58-201ENST00000369487 FLT4P35916 1363 aa28.31■■■□□ 2.12
CD58-201ENST00000369487 BRWD3Q6RI45 1802 aa28.29■■■□□ 2.12
CD58-201ENST00000369487 FAM208AQ9UK61 1670 aaKnown RBP28.29■■■□□ 2.12
CD58-201ENST00000369487 MORC1Q86VD1 984 aa28.29■■■□□ 2.12
CD58-201ENST00000369487 KRT27Q7Z3Y8 459 aa28.28■■■□□ 2.12
CD58-201ENST00000369487 NLRP2Q9NX02 1062 aa28.27■■■□□ 2.12
CD58-201ENST00000369487 SMG6Q86US8 1419 aaKnown RBP28.26■■■□□ 2.12
CD58-201ENST00000369487 PEAK1Q9H792 1746 aa28.26■■■□□ 2.12
CD58-201ENST00000369487 INSRP06213 1382 aa28.26■■■□□ 2.12
CD58-201ENST00000369487 CDCA7Q9BWT1 371 aaPredicted RBP28.26■■■□□ 2.11
CD58-201ENST00000369487 EMILIN1Q9Y6C2 1016 aa28.26■■■□□ 2.11
CD58-201ENST00000369487 NPC1L1Q9UHC9 1359 aa28.25■■■□□ 2.11
CD58-201ENST00000369487 TNNT2P45379 298 aaPredicted RBP28.25■■■□□ 2.11
CD58-201ENST00000369487 MAP2P11137 1827 aaKnown RBP28.25■■■□□ 2.11
CD58-201ENST00000369487 PARP4Q9UKK3 1724 aaKnown RBP28.24■■■□□ 2.11
CD58-201ENST00000369487 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
CD58-201ENST00000369487 WNK3Q9BYP7 1800 aa28.24■■■□□ 2.11
CD58-201ENST00000369487 POLKQ9UBT6 870 aa28.23■■■□□ 2.11
CD58-201ENST00000369487 PPM1GO15355 546 aaPredicted RBP28.22■■■□□ 2.11
CD58-201ENST00000369487 HSP90AB2PQ58FF8 381 aa28.21■■■□□ 2.11
CD58-201ENST00000369487 DISP2A7MBM2 1401 aa28.2■■■□□ 2.11
CD58-201ENST00000369487 UPF1Q92900 1129 aaKnown RBP eCLIP28.2■■■□□ 2.1
CD58-201ENST00000369487 PDE3BQ13370 1112 aa28.19■■■□□ 2.1
CD58-201ENST00000369487 CC2D1BQ5T0F9 858 aaKnown RBP28.18■■■□□ 2.1
CD58-201ENST00000369487 LRRC37A3O60309 1634 aa28.18■■■□□ 2.1
CD58-201ENST00000369487 DDB1Q16531 1140 aa28.16■■■□□ 2.1
CD58-201ENST00000369487 IL2RBP14784 551 aa28.15■■■□□ 2.1
CD58-201ENST00000369487 RGPD2P0DJD1 1756 aa28.12■■■□□ 2.09
CD58-201ENST00000369487 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
CD58-201ENST00000369487 CCDC125Q86Z20 511 aa28.12■■■□□ 2.09
CD58-201ENST00000369487 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
CD58-201ENST00000369487 EXOC5O00471 708 aa28.11■■■□□ 2.09
CD58-201ENST00000369487 EP400Q96L91 3159 aa28.11■■■□□ 2.09
CD58-201ENST00000369487 TNS2Q63HR2 1409 aa28.1■■■□□ 2.09
CD58-201ENST00000369487 FAM196AQ6ZSG2 479 aa28.1■■■□□ 2.09
CD58-201ENST00000369487 FAM182BQ5T319 152 aa28.08■■■□□ 2.09
CD58-201ENST00000369487 OVOS2A0A0G2JMS6 1433 aa28.08■■■□□ 2.09
CD58-201ENST00000369487 CNGB1Q14028 1251 aaPredicted RBP28.07■■■□□ 2.08
CD58-201ENST00000369487 EIF4A2Q14240 407 aaKnown RBP28.06■■■□□ 2.08
CD58-201ENST00000369487 USHBP1Q8N6Y0 703 aa28.05■■■□□ 2.08
CD58-201ENST00000369487 NCAPD2Q15021 1401 aa28.04■■■□□ 2.08
CD58-201ENST00000369487 RAPGEF4Q8WZA2 1011 aa28.04■■■□□ 2.08
CD58-201ENST00000369487 MTHFSP49914 203 aa28.03■■■□□ 2.08
CD58-201ENST00000369487 DDX10Q13206 875 aaKnown RBP28.03■■■□□ 2.08
CD58-201ENST00000369487 SF3B2Q13435 895 aaKnown RBP28.03■■■□□ 2.08
CD58-201ENST00000369487 MEGF6O75095 1541 aa28.02■■■□□ 2.08
CD58-201ENST00000369487 MARCH10Q8NA82 808 aaPredicted RBP28.02■■■□□ 2.08
CD58-201ENST00000369487 EYA1Q99502 592 aa28.02■■■□□ 2.08
CD58-201ENST00000369487 RGPD1P0DJD0 1748 aa28.01■■■□□ 2.07
CD58-201ENST00000369487 BCL9O00512 1426 aa28.01■■■□□ 2.07
CD58-201ENST00000369487 TATP17735 454 aaPredicted RBP28■■■□□ 2.07
CD58-201ENST00000369487 IGSF1Q8N6C5 1336 aa27.98■■■□□ 2.07
CD58-201ENST00000369487 ZCRB1Q8TBF4 217 aaKnown RBP27.96■■■□□ 2.07
CD58-201ENST00000369487 TRIM37O94972 964 aa27.95■■■□□ 2.06
CD58-201ENST00000369487 PLEKHG2Q9H7P9 1386 aa27.95■■■□□ 2.06
CD58-201ENST00000369487 ZNF316A6NFI3 1004 aaPredicted RBP27.94■■■□□ 2.06
CD58-201ENST00000369487 IL13P35225 146 aa27.94■■■□□ 2.06
CD58-201ENST00000369487 TNS1Q9HBL0 1735 aaKnown RBP27.93■■■□□ 2.06
CD58-201ENST00000369487 PARD3Q8TEW0 1356 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms