RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
SIM1-202ENST00000369208 KANK4Q5T7N3 995 aaPredicted RBP11.91□□□□□ -0.5
SIM1-202ENST00000369208 NLRP6P59044 892 aa11.91□□□□□ -0.5
SIM1-202ENST00000369208 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
SIM1-202ENST00000369208 NOL8Q76FK4 1167 aaKnown RBP11.91□□□□□ -0.5
SIM1-202ENST00000369208 ANKLE2Q86XL3 938 aa11.91□□□□□ -0.5
SIM1-202ENST00000369208 MCM2P49736 904 aa11.91□□□□□ -0.5
SIM1-202ENST00000369208 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
SIM1-202ENST00000369208 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
SIM1-202ENST00000369208 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
SIM1-202ENST00000369208 TUBB4BP68371 445 aa11.9□□□□□ -0.5
SIM1-202ENST00000369208 RNF168Q8IYW5 571 aaPredicted RBP11.9□□□□□ -0.5
SIM1-202ENST00000369208 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
SIM1-202ENST00000369208 OGFRQ9NZT2 677 aa11.9□□□□□ -0.5
SIM1-202ENST00000369208 PAF1Q8N7H5 531 aa11.9□□□□□ -0.51
SIM1-202ENST00000369208 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
SIM1-202ENST00000369208 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
SIM1-202ENST00000369208 ST20-MTHFSA0A0A6YYL1 179 aa11.89□□□□□ -0.51
SIM1-202ENST00000369208 RIPK4P57078 832 aa11.89□□□□□ -0.51
SIM1-202ENST00000369208 HIP1O00291 1037 aa11.89□□□□□ -0.51
SIM1-202ENST00000369208 MCM4P33991 863 aa11.89□□□□□ -0.51
SIM1-202ENST00000369208 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
SIM1-202ENST00000369208 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
SIM1-202ENST00000369208 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 USP47Q96K76 1375 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 FYB1O15117 783 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 PNISRQ8TF01 805 aaKnown RBP11.88□□□□□ -0.51
SIM1-202ENST00000369208 NEMFO60524 1076 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 RBM25P49756 843 aaKnown RBP11.88□□□□□ -0.51
SIM1-202ENST00000369208 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 CEP120Q8N960 986 aa11.88□□□□□ -0.51
SIM1-202ENST00000369208 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 KIF18AQ8NI77 898 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 PSMA5P28066 241 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 CCDC50Q8IVM0 306 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 PPM1EQ8WY54 764 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 TCHPQ9BT92 498 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 TUBB4AP04350 444 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.87□□□□□ -0.51
SIM1-202ENST00000369208 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
SIM1-202ENST00000369208 KIF1CO43896 1103 aaKnown RBP11.87□□□□□ -0.51
SIM1-202ENST00000369208 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
SIM1-202ENST00000369208 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 UBXN4Q92575 508 aa11.87□□□□□ -0.51
SIM1-202ENST00000369208 RRP7AQ9Y3A4 280 aaKnown RBP11.87□□□□□ -0.51
SIM1-202ENST00000369208 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
SIM1-202ENST00000369208 SH2D4BQ5SQS7 431 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 TXLNAP40222 546 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.86□□□□□ -0.51
SIM1-202ENST00000369208 OFD1O75665 1012 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 UBTFL1P0CB47 393 aaPredicted RBP11.86□□□□□ -0.51
SIM1-202ENST00000369208 DMTNQ08495 405 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
SIM1-202ENST00000369208 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
SIM1-202ENST00000369208 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
SIM1-202ENST00000369208 INTS3Q68E01 1043 aaKnown RBP11.85□□□□□ -0.51
SIM1-202ENST00000369208 CCDC192P0DO97 292 aa11.85□□□□□ -0.51
SIM1-202ENST00000369208 TNNT1P13805 278 aa11.85□□□□□ -0.51
SIM1-202ENST00000369208 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
SIM1-202ENST00000369208 AP1ARQ63HQ0 302 aa11.85□□□□□ -0.51
SIM1-202ENST00000369208 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
SIM1-202ENST00000369208 RSRC1Q96IZ7 334 aaKnown RBP11.85□□□□□ -0.51
SIM1-202ENST00000369208 JAKMIP3Q5VZ66 844 aa11.85□□□□□ -0.51
SIM1-202ENST00000369208 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
SIM1-202ENST00000369208 GNAI3P08754 354 aa11.84□□□□□ -0.51
SIM1-202ENST00000369208 DESP17661 470 aa11.84□□□□□ -0.51
SIM1-202ENST00000369208 RBBP5Q15291 538 aaKnown RBP11.84□□□□□ -0.51
SIM1-202ENST00000369208 SLC52A1Q9NWF4 448 aa11.84□□□□□ -0.51
SIM1-202ENST00000369208 SEPT6Q14141 434 aa11.83□□□□□ -0.51
SIM1-202ENST00000369208 NACAP1Q9BZK3 213 aa11.83□□□□□ -0.51
SIM1-202ENST00000369208 ERLIN2O94905 339 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 ATP6V1AP38606 617 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 DZIP1LQ8IYY4 767 aaKnown RBP11.83□□□□□ -0.52
SIM1-202ENST00000369208 TRIM5Q9C035 493 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
SIM1-202ENST00000369208 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
SIM1-202ENST00000369208 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
SIM1-202ENST00000369208 CCDC73Q6ZRK6 1079 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
SIM1-202ENST00000369208 CENPHQ9H3R5 247 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 CABP4P57796 275 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
SIM1-202ENST00000369208 A6NNZ2 444 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
SIM1-202ENST00000369208 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms