RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 RGS12O14924 1447 aa17.27■□□□□ 0.35
EFNA1-201ENST00000368406 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
EFNA1-201ENST00000368406 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
EFNA1-201ENST00000368406 GLI3P10071 1580 aa17.26■□□□□ 0.35
EFNA1-201ENST00000368406 SOX12O15370 315 aa17.26■□□□□ 0.35
EFNA1-201ENST00000368406 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
EFNA1-201ENST00000368406 ABCC6O95255 1503 aa17.25■□□□□ 0.35
EFNA1-201ENST00000368406 COL18A1P39060 1754 aa17.25■□□□□ 0.35
EFNA1-201ENST00000368406 NSD2O96028 1365 aa17.25■□□□□ 0.35
EFNA1-201ENST00000368406 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
EFNA1-201ENST00000368406 STRN4Q9NRL3 753 aa17.24■□□□□ 0.35
EFNA1-201ENST00000368406 SPATA31A1Q5TZJ5 1347 aa17.24■□□□□ 0.35
EFNA1-201ENST00000368406 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
EFNA1-201ENST00000368406 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
EFNA1-201ENST00000368406 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
EFNA1-201ENST00000368406 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
EFNA1-201ENST00000368406 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.34
EFNA1-201ENST00000368406 MORC1Q86VD1 984 aa17.21■□□□□ 0.34
EFNA1-201ENST00000368406 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
EFNA1-201ENST00000368406 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
EFNA1-201ENST00000368406 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
EFNA1-201ENST00000368406 THRAP3Q9Y2W1 955 aaKnown RBP17.2■□□□□ 0.34
EFNA1-201ENST00000368406 EP400Q96L91 3159 aa17.2■□□□□ 0.34
EFNA1-201ENST00000368406 LTN1O94822 1766 aa17.19■□□□□ 0.34
EFNA1-201ENST00000368406 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
EFNA1-201ENST00000368406 CRB1P82279 1406 aa17.19■□□□□ 0.34
EFNA1-201ENST00000368406 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
EFNA1-201ENST00000368406 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
EFNA1-201ENST00000368406 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
EFNA1-201ENST00000368406 IP6K1Q92551 441 aa17.18■□□□□ 0.34
EFNA1-201ENST00000368406 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
EFNA1-201ENST00000368406 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
EFNA1-201ENST00000368406 RGPD5Q99666 1765 aa17.17■□□□□ 0.34
EFNA1-201ENST00000368406 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
EFNA1-201ENST00000368406 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
EFNA1-201ENST00000368406 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
EFNA1-201ENST00000368406 FBLN1P23142 703 aa17.15■□□□□ 0.34
EFNA1-201ENST00000368406 ERBB3P21860 1342 aa17.15■□□□□ 0.34
EFNA1-201ENST00000368406 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
EFNA1-201ENST00000368406 ANP32CO43423 234 aa17.14■□□□□ 0.33
EFNA1-201ENST00000368406 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
EFNA1-201ENST00000368406 AMPHP49418 695 aa17.14■□□□□ 0.33
EFNA1-201ENST00000368406 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
EFNA1-201ENST00000368406 THSD7AQ9UPZ6 1657 aa17.14■□□□□ 0.33
EFNA1-201ENST00000368406 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
EFNA1-201ENST00000368406 A0A0G2JS52 829 aa17.13■□□□□ 0.33
EFNA1-201ENST00000368406 HOXC9P31274 260 aa17.13■□□□□ 0.33
EFNA1-201ENST00000368406 MYT1Q01538 1121 aa17.13■□□□□ 0.33
EFNA1-201ENST00000368406 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
EFNA1-201ENST00000368406 BRWD3Q6RI45 1802 aa17.13■□□□□ 0.33
EFNA1-201ENST00000368406 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
EFNA1-201ENST00000368406 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.337e-36■■■■■ 108.3
EFNA1-201ENST00000368406 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
EFNA1-201ENST00000368406 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
EFNA1-201ENST00000368406 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
EFNA1-201ENST00000368406 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
EFNA1-201ENST00000368406 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
EFNA1-201ENST00000368406 RALBP1Q15311 655 aa17.1■□□□□ 0.33
EFNA1-201ENST00000368406 FLT4P35916 1363 aa17.09■□□□□ 0.33
EFNA1-201ENST00000368406 PARD3Q8TEW0 1356 aa17.09■□□□□ 0.33
EFNA1-201ENST00000368406 NLRP2Q9NX02 1062 aa17.09■□□□□ 0.33
EFNA1-201ENST00000368406 INSRP06213 1382 aa17.08■□□□□ 0.33
EFNA1-201ENST00000368406 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
EFNA1-201ENST00000368406 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
EFNA1-201ENST00000368406 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
EFNA1-201ENST00000368406 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
EFNA1-201ENST00000368406 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
EFNA1-201ENST00000368406 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
EFNA1-201ENST00000368406 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
EFNA1-201ENST00000368406 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
EFNA1-201ENST00000368406 DISP2A7MBM2 1401 aa17.06■□□□□ 0.32
EFNA1-201ENST00000368406 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
EFNA1-201ENST00000368406 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
EFNA1-201ENST00000368406 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
EFNA1-201ENST00000368406 PPP2R1AP30153 589 aa17.04■□□□□ 0.32
EFNA1-201ENST00000368406 DDB1Q16531 1140 aa17.04■□□□□ 0.32
EFNA1-201ENST00000368406 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
EFNA1-201ENST00000368406 FAM196AQ6ZSG2 479 aa17.04■□□□□ 0.32
EFNA1-201ENST00000368406 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
EFNA1-201ENST00000368406 IL2RBP14784 551 aa17.03■□□□□ 0.32
EFNA1-201ENST00000368406 MTHFSP49914 203 aa17.03■□□□□ 0.32
EFNA1-201ENST00000368406 CFAP53Q96M91 514 aa17.03■□□□□ 0.32
EFNA1-201ENST00000368406 EXOC5O00471 708 aa17.02■□□□□ 0.31
EFNA1-201ENST00000368406 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.31
EFNA1-201ENST00000368406 NBPF4Q96M43 638 aa17.02■□□□□ 0.31
EFNA1-201ENST00000368406 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
EFNA1-201ENST00000368406 FAM182BQ5T319 152 aa17■□□□□ 0.31
EFNA1-201ENST00000368406 RGPD2P0DJD1 1756 aa16.98■□□□□ 0.31
EFNA1-201ENST00000368406 BCL9O00512 1426 aa16.98■□□□□ 0.31
EFNA1-201ENST00000368406 SF3B2Q13435 895 aaKnown RBP16.97■□□□□ 0.31
EFNA1-201ENST00000368406 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
EFNA1-201ENST00000368406 TNS2Q63HR2 1409 aa16.97■□□□□ 0.31
EFNA1-201ENST00000368406 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
EFNA1-201ENST00000368406 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
EFNA1-201ENST00000368406 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.3
EFNA1-201ENST00000368406 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
EFNA1-201ENST00000368406 EYA1Q99502 592 aa16.95■□□□□ 0.3
EFNA1-201ENST00000368406 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
EFNA1-201ENST00000368406 TRIM37O94972 964 aa16.94■□□□□ 0.3
EFNA1-201ENST00000368406 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms