RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
PTPRC-204ENST00000367379 ARHGAP9Q9BRR9 750 aa11.75□□□□□ -0.53
PTPRC-204ENST00000367379 UPP2O95045 317 aa11.74□□□□□ -0.53
PTPRC-204ENST00000367379 VSIG8P0DPA2 414 aa11.74□□□□□ -0.53
PTPRC-204ENST00000367379 BMP2P12643 396 aa11.74□□□□□ -0.53
PTPRC-204ENST00000367379 NR6A1Q15406 480 aa11.74□□□□□ -0.53
PTPRC-204ENST00000367379 MAN1A2O60476 641 aa11.73□□□□□ -0.53
PTPRC-204ENST00000367379 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
PTPRC-204ENST00000367379 OCSTAMPQ9BR26 566 aa11.73□□□□□ -0.53
PTPRC-204ENST00000367379 TSEN34Q9BSV6 310 aaKnown RBP11.72□□□□□ -0.53
PTPRC-204ENST00000367379 PPP1R26Q5T8A7 1209 aaPredicted RBP11.71□□□□□ -0.53
PTPRC-204ENST00000367379 CDV3Q9UKY7 258 aaKnown RBP11.71□□□□□ -0.53
PTPRC-204ENST00000367379 AP1G2O75843 785 aa11.7□□□□□ -0.54
PTPRC-204ENST00000367379 Q6ZVU0 165 aa11.7□□□□□ -0.54
PTPRC-204ENST00000367379 SLC10A4Q96EP9 437 aa11.7□□□□□ -0.54
PTPRC-204ENST00000367379 KCTD15Q96SI1 283 aaPredicted RBP11.7□□□□□ -0.54
PTPRC-204ENST00000367379 DNMT3LQ9UJW3 386 aa11.7□□□□□ -0.54
PTPRC-204ENST00000367379 GPSM3Q9Y4H4 160 aa11.7□□□□□ -0.54
PTPRC-204ENST00000367379 ZSCAN1Q8NBB4 408 aa11.69□□□□□ -0.54
PTPRC-204ENST00000367379 PTK2Q05397 1052 aa11.68□□□□□ -0.54
PTPRC-204ENST00000367379 ZBTB33Q86T24 672 aa11.68□□□□□ -0.54
PTPRC-204ENST00000367379 EPS8L1Q8TE68 723 aa11.68□□□□□ -0.54
PTPRC-204ENST00000367379 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
PTPRC-204ENST00000367379 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
PTPRC-204ENST00000367379 PPFIA3O75145 1194 aa11.66□□□□□ -0.54
PTPRC-204ENST00000367379 USP17L8P0C7I0 530 aa11.66□□□□□ -0.54
PTPRC-204ENST00000367379 CBLBQ13191 982 aa11.66□□□□□ -0.54
PTPRC-204ENST00000367379 INTS6LQ5JSJ4 861 aaKnown RBP11.66□□□□□ -0.54
PTPRC-204ENST00000367379 ATP1B4Q9UN42 357 aaPredicted RBP11.66□□□□□ -0.54
PTPRC-204ENST00000367379 ADAM32Q8TC27 787 aa11.65□□□□□ -0.54
PTPRC-204ENST00000367379 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
PTPRC-204ENST00000367379 FAM181BA6NEQ2 426 aa11.64□□□□□ -0.55
PTPRC-204ENST00000367379 SPINT1O43278 529 aa11.64□□□□□ -0.55
PTPRC-204ENST00000367379 RFC5P40937 340 aa11.64□□□□□ -0.55
PTPRC-204ENST00000367379 DHX9Q08211 1270 aaKnown RBP11.64□□□□□ -0.55
PTPRC-204ENST00000367379 TTLL8A6PVC2 850 aa11.63□□□□□ -0.55
PTPRC-204ENST00000367379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.55
PTPRC-204ENST00000367379 PNMA1Q8ND90 353 aa11.61□□□□□ -0.55
PTPRC-204ENST00000367379 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
PTPRC-204ENST00000367379 TRIM34Q9BYJ4 488 aa11.59□□□□□ -0.55
PTPRC-204ENST00000367379 PTSQ03393 145 aa11.57□□□□□ -0.56
PTPRC-204ENST00000367379 AGBL1Q96MI9 1066 aa11.57□□□□□ -0.56
PTPRC-204ENST00000367379 FIGNL2A6NMB9 653 aa11.56□□□□□ -0.56
PTPRC-204ENST00000367379 ESPNB1AK53 854 aa11.56□□□□□ -0.56
PTPRC-204ENST00000367379 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
PTPRC-204ENST00000367379 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
PTPRC-204ENST00000367379 PCMTD1Q96MG8 357 aaPredicted RBP11.55□□□□□ -0.56
PTPRC-204ENST00000367379 TMPRSS4Q9NRS4 437 aa11.55□□□□□ -0.56
PTPRC-204ENST00000367379 LILRA1O75019 489 aa11.54□□□□□ -0.56
PTPRC-204ENST00000367379 DZIP3Q86Y13 1208 aaKnown RBP11.54□□□□□ -0.56
PTPRC-204ENST00000367379 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
PTPRC-204ENST00000367379 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
PTPRC-204ENST00000367379 CTSOP43234 321 aaPredicted RBP11.53□□□□□ -0.56
PTPRC-204ENST00000367379 RELBQ01201 579 aa11.53□□□□□ -0.56
PTPRC-204ENST00000367379 GPR161Q8N6U8 529 aaKnown RBP11.53□□□□□ -0.56
PTPRC-204ENST00000367379 NANOS1Q8WY41 292 aaKnown RBP11.53□□□□□ -0.56
PTPRC-204ENST00000367379 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
PTPRC-204ENST00000367379 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.57
PTPRC-204ENST00000367379 KDF1Q8NAX2 398 aaPredicted RBP11.52□□□□□ -0.57
PTPRC-204ENST00000367379 INSM2Q96T92 566 aaPredicted RBP11.52□□□□□ -0.57
PTPRC-204ENST00000367379 ADH1AP07327 375 aa11.51□□□□□ -0.57
PTPRC-204ENST00000367379 ADD1P35611 737 aaKnown RBP11.51□□□□□ -0.57
PTPRC-204ENST00000367379 KRT76Q01546 638 aa11.51□□□□□ -0.57
PTPRC-204ENST00000367379 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
PTPRC-204ENST00000367379 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
PTPRC-204ENST00000367379 RAB15P59190 212 aa11.49□□□□□ -0.57
PTPRC-204ENST00000367379 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
PTPRC-204ENST00000367379 RNF217Q8TC41 542 aa11.49□□□□□ -0.57
PTPRC-204ENST00000367379 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
PTPRC-204ENST00000367379 ZNF395Q9H8N7 513 aaPredicted RBP11.48□□□□□ -0.57
PTPRC-204ENST00000367379 ZBBXA8MT70 800 aa11.47□□□□□ -0.57
PTPRC-204ENST00000367379 PTGIRP43119 386 aa11.47□□□□□ -0.57
PTPRC-204ENST00000367379 POLMQ9NP87 494 aaPredicted RBP11.47□□□□□ -0.57
PTPRC-204ENST00000367379 ITGA6P23229 1130 aa11.46□□□□□ -0.57
PTPRC-204ENST00000367379 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
PTPRC-204ENST00000367379 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
PTPRC-204ENST00000367379 FBXO45P0C2W1 286 aa11.44□□□□□ -0.58
PTPRC-204ENST00000367379 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
PTPRC-204ENST00000367379 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
PTPRC-204ENST00000367379 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
PTPRC-204ENST00000367379 COL25A1Q9BXS0 654 aaPredicted RBP11.43□□□□□ -0.58
PTPRC-204ENST00000367379 SOCS7O14512 581 aa11.42□□□□□ -0.58
PTPRC-204ENST00000367379 GIGYF1O75420 1035 aaPredicted RBP11.42□□□□□ -0.58
PTPRC-204ENST00000367379 CYLDQ9NQC7 956 aa11.42□□□□□ -0.58
PTPRC-204ENST00000367379 RNFT1Q5M7Z0 435 aa11.41□□□□□ -0.58
PTPRC-204ENST00000367379 VWA5B2Q8N398 1253 aa11.41□□□□□ -0.58
PTPRC-204ENST00000367379 PCDHB9Q9Y5E1 797 aa11.41□□□□□ -0.58
PTPRC-204ENST00000367379 GPR37L1O60883 481 aa11.4□□□□□ -0.58
PTPRC-204ENST00000367379 CCDC125Q86Z20 511 aa11.4□□□□□ -0.58
PTPRC-204ENST00000367379 BANK1Q8NDB2 785 aa11.4□□□□□ -0.58
PTPRC-204ENST00000367379 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
PTPRC-204ENST00000367379 RNF144AP50876 292 aaPredicted RBP11.39□□□□□ -0.59
PTPRC-204ENST00000367379 SV2AQ7L0J3 742 aa11.38□□□□□ -0.59
PTPRC-204ENST00000367379 LYSMD3Q7Z3D4 306 aa11.38□□□□□ -0.59
PTPRC-204ENST00000367379 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
PTPRC-204ENST00000367379 NR1H3Q13133 447 aa11.37□□□□□ -0.59
PTPRC-204ENST00000367379 CDC14CA4D256 554 aa11.36□□□□□ -0.59
PTPRC-204ENST00000367379 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
PTPRC-204ENST00000367379 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
PTPRC-204ENST00000367379 GSK3AP49840 483 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms