RNA–Protein interactions for RNA: ENST00000355135.6

GPM6B-202, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPM6B, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-202ENST00000355135 GLI3P10071 1580 aa18.57■□□□□ 0.56
GPM6B-202ENST00000355135 EDC4Q6P2E9 1401 aaKnown RBP18.56■□□□□ 0.56
GPM6B-202ENST00000355135 CHRNA2Q15822 529 aa18.55■□□□□ 0.56
GPM6B-202ENST00000355135 USP54Q70EL1 1684 aa18.54■□□□□ 0.56
GPM6B-202ENST00000355135 INSRP06213 1382 aa18.54■□□□□ 0.56
GPM6B-202ENST00000355135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
GPM6B-202ENST00000355135 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
GPM6B-202ENST00000355135 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
GPM6B-202ENST00000355135 CCDC9Q9Y3X0 531 aaKnown RBP18.53■□□□□ 0.56
GPM6B-202ENST00000355135 LMO7Q8WWI1 1683 aa18.52■□□□□ 0.56
GPM6B-202ENST00000355135 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
GPM6B-202ENST00000355135 NME9Q86XW9 330 aa18.5■□□□□ 0.55
GPM6B-202ENST00000355135 CAMTA1Q9Y6Y1 1673 aa18.5■□□□□ 0.55
GPM6B-202ENST00000355135 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
GPM6B-202ENST00000355135 NSD2O96028 1365 aa18.49■□□□□ 0.55
GPM6B-202ENST00000355135 ONECUT3O60422 494 aaPredicted RBP18.49■□□□□ 0.55
GPM6B-202ENST00000355135 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
GPM6B-202ENST00000355135 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
GPM6B-202ENST00000355135 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
GPM6B-202ENST00000355135 ZRANB1Q9UGI0 708 aa18.48■□□□□ 0.55
GPM6B-202ENST00000355135 NFAT5O94916 1531 aa18.48■□□□□ 0.55
GPM6B-202ENST00000355135 COL18A1P39060 1754 aa18.48■□□□□ 0.55
GPM6B-202ENST00000355135 EVA1CP58658 441 aa18.47■□□□□ 0.55
GPM6B-202ENST00000355135 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
GPM6B-202ENST00000355135 ARHGEF25Q86VW2 580 aa18.47■□□□□ 0.55
GPM6B-202ENST00000355135 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
GPM6B-202ENST00000355135 SEPT12Q8IYM1 358 aa18.46■□□□□ 0.55
GPM6B-202ENST00000355135 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.55
GPM6B-202ENST00000355135 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.55
GPM6B-202ENST00000355135 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
GPM6B-202ENST00000355135 BRWD3Q6RI45 1802 aa18.45■□□□□ 0.54
GPM6B-202ENST00000355135 SOX12O15370 315 aa18.45■□□□□ 0.54
GPM6B-202ENST00000355135 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
GPM6B-202ENST00000355135 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
GPM6B-202ENST00000355135 COL5A2P05997 1499 aaPredicted RBP18.45■□□□□ 0.54
GPM6B-202ENST00000355135 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
GPM6B-202ENST00000355135 ABCC6O95255 1503 aa18.44■□□□□ 0.54
GPM6B-202ENST00000355135 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
GPM6B-202ENST00000355135 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
GPM6B-202ENST00000355135 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
GPM6B-202ENST00000355135 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
GPM6B-202ENST00000355135 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
GPM6B-202ENST00000355135 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
GPM6B-202ENST00000355135 LTN1O94822 1766 aa18.42■□□□□ 0.54
GPM6B-202ENST00000355135 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
GPM6B-202ENST00000355135 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 COG3Q96JB2 828 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 A0A0G2JS52 829 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 NEFLP07196 543 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 MYT1Q01538 1121 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 AXIN2Q9Y2T1 843 aa18.41■□□□□ 0.54
GPM6B-202ENST00000355135 FYB1O15117 783 aa18.4■□□□□ 0.54
GPM6B-202ENST00000355135 CRB1P82279 1406 aa18.4■□□□□ 0.54
GPM6B-202ENST00000355135 BARGINQ6ZT62 677 aa18.39■□□□□ 0.53
GPM6B-202ENST00000355135 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
GPM6B-202ENST00000355135 KRT27Q7Z3Y8 459 aa18.38■□□□□ 0.53
GPM6B-202ENST00000355135 TCP11L2Q8N4U5 519 aa18.38■□□□□ 0.53
GPM6B-202ENST00000355135 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
GPM6B-202ENST00000355135 WDR17Q8IZU2 1322 aa18.38■□□□□ 0.53
GPM6B-202ENST00000355135 FKBP8Q14318 412 aa18.38■□□□□ 0.53
GPM6B-202ENST00000355135 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
GPM6B-202ENST00000355135 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
GPM6B-202ENST00000355135 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
GPM6B-202ENST00000355135 TOM1L2Q6ZVM7 507 aa18.36■□□□□ 0.53
GPM6B-202ENST00000355135 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
GPM6B-202ENST00000355135 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
GPM6B-202ENST00000355135 PARP4Q9UKK3 1724 aaKnown RBP18.32■□□□□ 0.52
GPM6B-202ENST00000355135 EP400Q96L91 3159 aa18.32■□□□□ 0.52
GPM6B-202ENST00000355135 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
GPM6B-202ENST00000355135 IP6K1Q92551 441 aa18.32■□□□□ 0.52
GPM6B-202ENST00000355135 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
GPM6B-202ENST00000355135 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
GPM6B-202ENST00000355135 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
GPM6B-202ENST00000355135 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
GPM6B-202ENST00000355135 MTHFSP49914 203 aa18.31■□□□□ 0.52
GPM6B-202ENST00000355135 ERBB3P21860 1342 aa18.31■□□□□ 0.52
GPM6B-202ENST00000355135 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
GPM6B-202ENST00000355135 FBLN1P23142 703 aa18.3■□□□□ 0.52
GPM6B-202ENST00000355135 AMPHP49418 695 aa18.29■□□□□ 0.52
GPM6B-202ENST00000355135 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
GPM6B-202ENST00000355135 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
GPM6B-202ENST00000355135 HOXC9P31274 260 aa18.28■□□□□ 0.52
GPM6B-202ENST00000355135 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
GPM6B-202ENST00000355135 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
GPM6B-202ENST00000355135 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
GPM6B-202ENST00000355135 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
GPM6B-202ENST00000355135 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
GPM6B-202ENST00000355135 LRRC37A3O60309 1634 aa18.26■□□□□ 0.51
GPM6B-202ENST00000355135 NLRP2Q9NX02 1062 aa18.26■□□□□ 0.51
GPM6B-202ENST00000355135 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
GPM6B-202ENST00000355135 FAM196AQ6ZSG2 479 aa18.25■□□□□ 0.51
GPM6B-202ENST00000355135 KIF24Q5T7B8 1368 aa18.25■□□□□ 0.51
GPM6B-202ENST00000355135 DISP2A7MBM2 1401 aa18.25■□□□□ 0.51
GPM6B-202ENST00000355135 DDB1Q16531 1140 aa18.25■□□□□ 0.51
GPM6B-202ENST00000355135 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
GPM6B-202ENST00000355135 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
GPM6B-202ENST00000355135 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
GPM6B-202ENST00000355135 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms