RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ANO2Q9NQ90 1003 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 THOC2Q8NI27 1593 aaKnown RBP2.67□□□□□ -1.98
BRCA1-202ENST00000354071 ADH1BP00325 375 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 PHTF2Q8N3S3 785 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 MTMR3Q13615 1198 aa2.67□□□□□ -1.98
BRCA1-202ENST00000354071 USB1Q9BQ65 265 aaKnown RBP2.67□□□□□ -1.98
BRCA1-202ENST00000354071 USP17L3A6NCW0 530 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 USP17L4A6NCW7 530 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 ATP9BO43861 1147 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 SEMA3FQ13275 785 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 WASHC4Q2M389 1173 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 USP17L2Q6R6M4 530 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 USP17L1Q7RTZ2 530 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 HELBQ8NG08 1087 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-202ENST00000354071 MRRFQ96E11 262 aaKnown RBP2.66□□□□□ -1.98
BRCA1-202ENST00000354071 NOVA2Q9UNW9 492 aaKnown RBP2.66□□□□□ -1.98
BRCA1-202ENST00000354071 ZNF594Q96JF6 807 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-202ENST00000354071 TOR4AQ9NXH8 423 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 COPS2P61201 443 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 NCOA4Q13772 614 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 KIAA1024Q9UPX6 916 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 JUNDP17535 347 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 GRM5P41594 1212 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 PTPRNQ16849 979 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 IL21Q9HBE4 155 aa2.66□□□□□ -1.98
BRCA1-202ENST00000354071 USP17L5A8MUK1 530 aa2.65□□□□□ -1.98
BRCA1-202ENST00000354071 PPP4CP60510 307 aa2.65□□□□□ -1.98
BRCA1-202ENST00000354071 MPNDQ8N594 471 aa2.65□□□□□ -1.98
BRCA1-202ENST00000354071 ANKLE1Q8NAG6 615 aa2.65□□□□□ -1.98
BRCA1-202ENST00000354071 PRM3Q9NNZ6 103 aa2.65□□□□□ -1.98
BRCA1-202ENST00000354071 SKIP12755 728 aa2.65□□□□□ -1.99
BRCA1-202ENST00000354071 ZNF16P17020 682 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-202ENST00000354071 SSFA2P28290 1259 aa2.65□□□□□ -1.99
BRCA1-202ENST00000354071 CLDN10P78369 228 aa2.65□□□□□ -1.99
BRCA1-202ENST00000354071 ZNF211Q13398 564 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-202ENST00000354071 PURBQ96QR8 312 aaKnown RBP2.65□□□□□ -1.99
BRCA1-202ENST00000354071 SPSB2Q99619 263 aa2.65□□□□□ -1.99
BRCA1-202ENST00000354071 GNEQ9Y223 722 aaKnown RBP2.65□□□□□ -1.99
BRCA1-202ENST00000354071 PTPN5P54829 565 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 GIPC2Q8TF65 315 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 HRH3Q9Y5N1 445 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L15C9J2P7 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L10C9JJH3 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L13C9JLJ4 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L12C9JPN9 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L11C9JVI0 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L21D6R901 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L18D6R9N7 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L22D6RA61 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L17D6RBQ6 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L19D6RCP7 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L20D6RJB6 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRMT3O60678 531 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 SH3BP2P78314 561 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 USP17L24Q0WX57 530 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PTK7Q13308 1070 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 CDK15Q96Q40 435 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 MKRN1Q9UHC7 482 aaKnown RBP2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRR20EP86478 221 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRR20CP86479 221 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRR20DP86480 221 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRR20BP86481 221 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRR20AP86496 221 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 RNF19AQ9NV58 838 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 AMOTL2Q9Y2J4 779 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PCDHB3Q9Y5E6 796 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 SHROOM4Q9ULL8 1493 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 RBM47A0AV96 593 aaKnown RBP2.64□□□□□ -1.99
BRCA1-202ENST00000354071 ESPNB1AK53 854 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PRIMPOLQ96LW4 560 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 PLA2G2EQ9NZK7 142 aa2.64□□□□□ -1.99
BRCA1-202ENST00000354071 STAU1O95793 577 aaKnown RBP2.63□□□□□ -1.99
BRCA1-202ENST00000354071 RASA1P20936 1047 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 TRMT44Q8IYL2 757 aaKnown RBP2.63□□□□□ -1.99
BRCA1-202ENST00000354071 MKNK1Q9BUB5 465 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 SOWAHDA6NJG2 315 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 DPYDQ12882 1025 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 POTEAQ6S8J7 498 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 HCN2Q9UL51 889 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 ANKRD33BA6NCL7 494 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 SPRYD7Q5W111 196 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 BCL2L13Q9BXK5 485 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 BIN2Q9UBW5 565 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-202ENST00000354071 SEPT3Q9UH03 358 aa2.63□□□□□ -1.99
BRCA1-202ENST00000354071 ABL1P00519 1130 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 NR1H3Q13133 447 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 C9orf131Q5VYM1 1079 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 TRAF7Q6Q0C0 670 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 NPAS4Q8IUM7 802 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 DISP3Q9P2K9 1392 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 AVPP01185 164 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 ATP2B4P23634 1241 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 UNC93B1Q9H1C4 597 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 ZBBXA8MT70 800 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 ECM1Q16610 540 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 OGFOD1Q8N543 542 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 FAM161BQ96MY7 647 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 NR3C2P08235 984 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 MARSP56192 900 aaKnown RBP2.62□□□□□ -1.99
BRCA1-202ENST00000354071 EIF4G2P78344 907 aaKnown RBP eCLIP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms