RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 FLT4P35916 1363 aa31.53■■■□□ 2.64
NR6A1-201ENST00000344523 C8orf37Q96NL8 207 aa31.53■■■□□ 2.64
NR6A1-201ENST00000344523 LTN1O94822 1766 aa31.53■■■□□ 2.64
NR6A1-201ENST00000344523 SMG6Q86US8 1419 aaKnown RBP31.52■■■□□ 2.64
NR6A1-201ENST00000344523 MEX3CQ5U5Q3 659 aaKnown RBP31.52■■■□□ 2.64
NR6A1-201ENST00000344523 MRS2Q9HD23 443 aa31.5■■■□□ 2.63
NR6A1-201ENST00000344523 CFAP53Q96M91 514 aa31.49■■■□□ 2.63
NR6A1-201ENST00000344523 BTG4Q9NY30 223 aa31.49■■■□□ 2.63
NR6A1-201ENST00000344523 NGLY1Q96IV0 654 aa31.49■■■□□ 2.63
NR6A1-201ENST00000344523 RTL1A6NKG5 1358 aa31.48■■■□□ 2.63
NR6A1-201ENST00000344523 CDK12Q9NYV4 1490 aaPredicted RBP31.47■■■□□ 2.63
NR6A1-201ENST00000344523 EIF4A2Q14240 407 aaKnown RBP31.46■■■□□ 2.63
NR6A1-201ENST00000344523 KIF24Q5T7B8 1368 aa31.46■■■□□ 2.63
NR6A1-201ENST00000344523 ANKRD24Q8TF21 1146 aa31.45■■■□□ 2.63
NR6A1-201ENST00000344523 STRN4Q9NRL3 753 aa31.45■■■□□ 2.63
NR6A1-201ENST00000344523 INSRP06213 1382 aa31.45■■■□□ 2.63
NR6A1-201ENST00000344523 CAMTA1Q9Y6Y1 1673 aa31.44■■■□□ 2.62
NR6A1-201ENST00000344523 DIAPH1O60610 1272 aaKnown RBP31.44■■■□□ 2.62
NR6A1-201ENST00000344523 COL18A1P39060 1754 aa31.43■■■□□ 2.62
NR6A1-201ENST00000344523 CCER2I3L3R5 266 aa31.42■■■□□ 2.62
NR6A1-201ENST00000344523 IL13P35225 146 aa31.42■■■□□ 2.62
NR6A1-201ENST00000344523 EVA1CP58658 441 aa31.42■■■□□ 2.62
NR6A1-201ENST00000344523 CSB-PGBD3P0DP91 1061 aa31.41■■■□□ 2.62
NR6A1-201ENST00000344523 COL3A1P02461 1466 aaPredicted RBP31.41■■■□□ 2.62
NR6A1-201ENST00000344523 BLMP54132 1417 aaPredicted RBP31.4■■■□□ 2.62
NR6A1-201ENST00000344523 U2SURPO15042 1029 aaKnown RBP31.4■■■□□ 2.62
NR6A1-201ENST00000344523 ERBB3P21860 1342 aa31.39■■■□□ 2.62
NR6A1-201ENST00000344523 RGPD5Q99666 1765 aa31.39■■■□□ 2.62
NR6A1-201ENST00000344523 COL14A1Q05707 1796 aaKnown RBP31.39■■■□□ 2.62
NR6A1-201ENST00000344523 LMO7Q8WWI1 1683 aa31.39■■■□□ 2.61
NR6A1-201ENST00000344523 LARP1Q6PKG0 1096 aaKnown RBP31.37■■■□□ 2.61
NR6A1-201ENST00000344523 COL5A2P05997 1499 aaPredicted RBP31.36■■■□□ 2.61
NR6A1-201ENST00000344523 FNBP4Q8N3X1 1017 aaPredicted RBP31.35■■■□□ 2.61
NR6A1-201ENST00000344523 USHBP1Q8N6Y0 703 aa31.35■■■□□ 2.61
NR6A1-201ENST00000344523 EYA1Q99502 592 aa31.35■■■□□ 2.61
NR6A1-201ENST00000344523 NLRP2Q9NX02 1062 aa31.35■■■□□ 2.61
NR6A1-201ENST00000344523 AFF2P51816 1311 aa31.35■■■□□ 2.61
NR6A1-201ENST00000344523 NBPF6Q5VWK0 638 aa31.35■■■□□ 2.61
NR6A1-201ENST00000344523 NBPF4Q96M43 638 aa31.35■■■□□ 2.61
NR6A1-201ENST00000344523 SLIT2O94813 1529 aa31.34■■■□□ 2.61
NR6A1-201ENST00000344523 USP21Q9UK80 565 aa31.34■■■□□ 2.61
NR6A1-201ENST00000344523 NUDCQ9Y266 331 aa31.34■■■□□ 2.61
NR6A1-201ENST00000344523 ABCC6O95255 1503 aa31.34■■■□□ 2.61
NR6A1-201ENST00000344523 TOM1L2Q6ZVM7 507 aa31.33■■■□□ 2.61
NR6A1-201ENST00000344523 PNISRQ8TF01 805 aaKnown RBP31.33■■■□□ 2.61
NR6A1-201ENST00000344523 U2AF1L5P0DN76 240 aaPredicted RBP31.33■■■□□ 2.61
NR6A1-201ENST00000344523 U2AF1Q01081 240 aaKnown RBP eCLIP31.33■■■□□ 2.61
NR6A1-201ENST00000344523 PLCH1Q4KWH8 1693 aa31.32■■■□□ 2.6
NR6A1-201ENST00000344523 WDR17Q8IZU2 1322 aa31.32■■■□□ 2.6
NR6A1-201ENST00000344523 UNC5CLQ8IV45 518 aa31.32■■■□□ 2.6
NR6A1-201ENST00000344523 FAM9BQ8IZU0 186 aa31.32■■■□□ 2.6
NR6A1-201ENST00000344523 USP35Q9P2H5 1018 aa31.31■■■□□ 2.6
NR6A1-201ENST00000344523 BCL9LQ86UU0 1499 aa31.31■■■□□ 2.6
NR6A1-201ENST00000344523 HMOX1P09601 288 aa31.31■■■□□ 2.6
NR6A1-201ENST00000344523 WDR43Q15061 677 aaKnown RBP eCLIP31.31■■■□□ 2.6
NR6A1-201ENST00000344523 AEBP1Q8IUX7 1158 aa31.29■■■□□ 2.6
NR6A1-201ENST00000344523 ADAMTS8Q9UP79 889 aa31.29■■■□□ 2.6
NR6A1-201ENST00000344523 CCDC9Q9Y3X0 531 aaKnown RBP31.28■■■□□ 2.6
NR6A1-201ENST00000344523 SULT6B1Q6IMI4 303 aa31.28■■■□□ 2.6
NR6A1-201ENST00000344523 IGSF1Q8N6C5 1336 aa31.25■■■□□ 2.59
NR6A1-201ENST00000344523 RGPD2P0DJD1 1756 aa31.23■■■□□ 2.59
NR6A1-201ENST00000344523 CRB1P82279 1406 aa31.22■■■□□ 2.59
NR6A1-201ENST00000344523 CARD10Q9BWT7 1032 aa31.22■■■□□ 2.59
NR6A1-201ENST00000344523 NRAPQ86VF7 1730 aa31.22■■■□□ 2.59
NR6A1-201ENST00000344523 NWD2Q9ULI1 1742 aa31.22■■■□□ 2.59
NR6A1-201ENST00000344523 VPS72Q15906 364 aa31.2■■■□□ 2.59
NR6A1-201ENST00000344523 CCDC146Q8IYE0 955 aa31.19■■■□□ 2.58
NR6A1-201ENST00000344523 QTRT2Q9H974 415 aaKnown RBP31.19■■■□□ 2.58
NR6A1-201ENST00000344523 RSPH6AQ9H0K4 717 aa31.18■■■□□ 2.58
NR6A1-201ENST00000344523 SPATA31A1Q5TZJ5 1347 aa31.18■■■□□ 2.58
NR6A1-201ENST00000344523 SPATA31A5Q5VU36 1347 aa31.18■■■□□ 2.58
NR6A1-201ENST00000344523 SPATA31A7Q8IWB4 1347 aa31.18■■■□□ 2.58
NR6A1-201ENST00000344523 SENP3-EIF4A1A0A087X0R7 540 aa31.17■■■□□ 2.58
NR6A1-201ENST00000344523 RGPD1P0DJD0 1748 aa31.17■■■□□ 2.58
NR6A1-201ENST00000344523 PRKAR2BP31323 418 aa31.17■■■□□ 2.58
NR6A1-201ENST00000344523 FCHSD2O94868 740 aa31.15■■■□□ 2.58
NR6A1-201ENST00000344523 PHF23Q9BUL5 403 aaPredicted RBP31.15■■■□□ 2.58
NR6A1-201ENST00000344523 TRPC5Q9UL62 973 aaPredicted RBP31.15■■■□□ 2.58
NR6A1-201ENST00000344523 TCP11L2Q8N4U5 519 aa31.14■■■□□ 2.58
NR6A1-201ENST00000344523 RGS17Q9UGC6 210 aaPredicted RBP31.14■■■□□ 2.58
NR6A1-201ENST00000344523 KDRP35968 1356 aa31.13■■■□□ 2.57
NR6A1-201ENST00000344523 ZNF772Q68DY9 489 aaPredicted RBP31.13■■■□□ 2.57
NR6A1-201ENST00000344523 RAPGEF4Q8WZA2 1011 aa31.12■■■□□ 2.57
NR6A1-201ENST00000344523 GJD4Q96KN9 370 aaPredicted RBP31.12■■■□□ 2.57
NR6A1-201ENST00000344523 PHACTR3Q96KR7 559 aa31.12■■■□□ 2.57
NR6A1-201ENST00000344523 ATRNO75882 1429 aa31.11■■■□□ 2.57
NR6A1-201ENST00000344523 NCAPD2Q15021 1401 aa31.11■■■□□ 2.57
NR6A1-201ENST00000344523 FAM208AQ9UK61 1670 aaKnown RBP31.1■■■□□ 2.57
NR6A1-201ENST00000344523 FAM98CQ17RN3 349 aaKnown RBP31.1■■■□□ 2.57
NR6A1-201ENST00000344523 PLEKHF1Q96S99 279 aa31.1■■■□□ 2.57
NR6A1-201ENST00000344523 IL2RBP14784 551 aa31.08■■■□□ 2.57
NR6A1-201ENST00000344523 MEGF6O75095 1541 aa31.08■■■□□ 2.57
NR6A1-201ENST00000344523 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.08■■■□□ 2.57
NR6A1-201ENST00000344523 TATP17735 454 aaPredicted RBP31.08■■■□□ 2.57
NR6A1-201ENST00000344523 THRAP3Q9Y2W1 955 aaKnown RBP31.06■■■□□ 2.56
NR6A1-201ENST00000344523 RUNDC1Q96C34 613 aa31.05■■■□□ 2.56
NR6A1-201ENST00000344523 POTEAQ6S8J7 498 aa31.05■■■□□ 2.56
NR6A1-201ENST00000344523 PNNQ9H307 717 aaKnown RBP31.04■■■□□ 2.56
NR6A1-201ENST00000344523 A0A0G2JS52 829 aa31.03■■■□□ 2.56
NR6A1-201ENST00000344523 MYT1Q01538 1121 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms