RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
HERPUD1-202ENST00000344114 SLIT3O75094 1523 aa18.71■□□□□ 0.59
HERPUD1-202ENST00000344114 COL18A1P39060 1754 aa18.71■□□□□ 0.59
HERPUD1-202ENST00000344114 PPIP5K1Q6PFW1 1433 aa18.71■□□□□ 0.59
HERPUD1-202ENST00000344114 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
HERPUD1-202ENST00000344114 CCDC7Q96M83 1385 aa18.7■□□□□ 0.58
HERPUD1-202ENST00000344114 PLSCR1O15162 318 aa18.69■□□□□ 0.58
HERPUD1-202ENST00000344114 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-202ENST00000344114 PPP1R1BQ9UD71 204 aaPredicted RBP18.68■□□□□ 0.58
HERPUD1-202ENST00000344114 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
HERPUD1-202ENST00000344114 QRICH2Q9H0J4 1663 aa18.68■□□□□ 0.58
HERPUD1-202ENST00000344114 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
HERPUD1-202ENST00000344114 WASHC2AQ641Q2 1341 aa18.68■□□□□ 0.58
HERPUD1-202ENST00000344114 PIK3C2AO00443 1686 aa18.67■□□□□ 0.58
HERPUD1-202ENST00000344114 USP6P35125 1406 aa18.66■□□□□ 0.58
HERPUD1-202ENST00000344114 BCL9O00512 1426 aa18.65■□□□□ 0.58
HERPUD1-202ENST00000344114 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
HERPUD1-202ENST00000344114 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
HERPUD1-202ENST00000344114 ANO8Q9HCE9 1232 aaPredicted RBP18.65■□□□□ 0.58
HERPUD1-202ENST00000344114 DDB1Q16531 1140 aa18.64■□□□□ 0.57
HERPUD1-202ENST00000344114 RGPD5Q99666 1765 aa18.64■□□□□ 0.57
HERPUD1-202ENST00000344114 MYOM1P52179 1685 aa18.63■□□□□ 0.57
HERPUD1-202ENST00000344114 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
HERPUD1-202ENST00000344114 BCL11BQ9C0K0 894 aaPredicted RBP18.63■□□□□ 0.57
HERPUD1-202ENST00000344114 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
HERPUD1-202ENST00000344114 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
HERPUD1-202ENST00000344114 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
HERPUD1-202ENST00000344114 NLRP6P59044 892 aa18.61■□□□□ 0.57
HERPUD1-202ENST00000344114 PTF1AQ7RTS3 328 aa18.61■□□□□ 0.57
HERPUD1-202ENST00000344114 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
HERPUD1-202ENST00000344114 CPSF1Q10570 1443 aaKnown RBP18.6■□□□□ 0.57
HERPUD1-202ENST00000344114 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
HERPUD1-202ENST00000344114 PROM2Q8N271 834 aa18.6■□□□□ 0.57
HERPUD1-202ENST00000344114 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
HERPUD1-202ENST00000344114 MARCH10Q8NA82 808 aaPredicted RBP18.59■□□□□ 0.57
HERPUD1-202ENST00000344114 CABP1Q9NZU7 370 aa18.59■□□□□ 0.57
HERPUD1-202ENST00000344114 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.57
HERPUD1-202ENST00000344114 PDGFDQ9GZP0 370 aaPredicted RBP18.58■□□□□ 0.57
HERPUD1-202ENST00000344114 AXIN2Q9Y2T1 843 aa18.58■□□□□ 0.57
HERPUD1-202ENST00000344114 PTGER2P43116 358 aa18.56■□□□□ 0.56
HERPUD1-202ENST00000344114 ANP32CO43423 234 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 ABCC6O95255 1503 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 NHSQ6T4R5 1651 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 ZBTB7AO95365 584 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 CARD10Q9BWT7 1032 aa18.55■□□□□ 0.56
HERPUD1-202ENST00000344114 NFAT5O94916 1531 aa18.54■□□□□ 0.56
HERPUD1-202ENST00000344114 CHD4Q14839 1912 aa18.54■□□□□ 0.56
HERPUD1-202ENST00000344114 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
HERPUD1-202ENST00000344114 PAPPAQ13219 1627 aa18.52■□□□□ 0.56
HERPUD1-202ENST00000344114 TNS2Q63HR2 1409 aa18.52■□□□□ 0.55
HERPUD1-202ENST00000344114 SLC15A2Q16348 729 aa18.52■□□□□ 0.55
HERPUD1-202ENST00000344114 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.55
HERPUD1-202ENST00000344114 STK32BQ9NY57 414 aa18.52■□□□□ 0.55
HERPUD1-202ENST00000344114 TTC21BQ7Z4L5 1316 aa18.51■□□□□ 0.55
HERPUD1-202ENST00000344114 USP54Q70EL1 1684 aa18.51■□□□□ 0.55
HERPUD1-202ENST00000344114 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
HERPUD1-202ENST00000344114 SGIP1Q9BQI5 828 aa18.5■□□□□ 0.55
HERPUD1-202ENST00000344114 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
HERPUD1-202ENST00000344114 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
HERPUD1-202ENST00000344114 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
HERPUD1-202ENST00000344114 TTC21AQ8NDW8 1320 aa18.5■□□□□ 0.55
HERPUD1-202ENST00000344114 CCER2I3L3R5 266 aa18.49■□□□□ 0.55
HERPUD1-202ENST00000344114 EXOC5O00471 708 aa18.49■□□□□ 0.55
HERPUD1-202ENST00000344114 ZNF784Q8NCA9 323 aaPredicted RBP18.49■□□□□ 0.55
HERPUD1-202ENST00000344114 SYT17Q9BSW7 474 aa18.49■□□□□ 0.55
HERPUD1-202ENST00000344114 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
HERPUD1-202ENST00000344114 FHDC1Q9C0D6 1143 aaPredicted RBP18.48■□□□□ 0.55
HERPUD1-202ENST00000344114 MTFR1LQ9H019 292 aa18.48■□□□□ 0.55
HERPUD1-202ENST00000344114 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
HERPUD1-202ENST00000344114 BTAF1O14981 1849 aa18.47■□□□□ 0.55
HERPUD1-202ENST00000344114 TESK2Q96S53 571 aa18.46■□□□□ 0.55
HERPUD1-202ENST00000344114 UTRNP46939 3433 aa18.46■□□□□ 0.55
HERPUD1-202ENST00000344114 LTN1O94822 1766 aa18.46■□□□□ 0.55
HERPUD1-202ENST00000344114 SOX12O15370 315 aa18.44■□□□□ 0.54
HERPUD1-202ENST00000344114 QSER1Q2KHR3 1735 aa18.44■□□□□ 0.54
HERPUD1-202ENST00000344114 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
HERPUD1-202ENST00000344114 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
HERPUD1-202ENST00000344114 SBNO2Q9Y2G9 1366 aa18.43■□□□□ 0.54
HERPUD1-202ENST00000344114 TMF1P82094 1093 aa18.43■□□□□ 0.54
HERPUD1-202ENST00000344114 KTN1Q86UP2 1357 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-202ENST00000344114 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
HERPUD1-202ENST00000344114 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
HERPUD1-202ENST00000344114 ERBB3P21860 1342 aa18.42■□□□□ 0.54
HERPUD1-202ENST00000344114 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
HERPUD1-202ENST00000344114 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
HERPUD1-202ENST00000344114 ARXQ96QS3 562 aa18.4■□□□□ 0.54
HERPUD1-202ENST00000344114 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
HERPUD1-202ENST00000344114 IL2RBP14784 551 aa18.38■□□□□ 0.53
HERPUD1-202ENST00000344114 ZNF827Q17R98 1081 aa18.38■□□□□ 0.53
HERPUD1-202ENST00000344114 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
HERPUD1-202ENST00000344114 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
HERPUD1-202ENST00000344114 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
HERPUD1-202ENST00000344114 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-202ENST00000344114 KAT6BQ8WYB5 2073 aa18.36■□□□□ 0.53
HERPUD1-202ENST00000344114 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
HERPUD1-202ENST00000344114 LRRC4BQ9NT99 713 aa18.36■□□□□ 0.53
HERPUD1-202ENST00000344114 NLRP2Q9NX02 1062 aa18.36■□□□□ 0.53
HERPUD1-202ENST00000344114 C1QTNF8P60827 252 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms