RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
PKN1-202ENST00000342216 GSPT1P15170 499 aaKnown RBP18.26■□□□□ 0.51
PKN1-202ENST00000342216 LAMC1P11047 1609 aa18.26■□□□□ 0.51
PKN1-202ENST00000342216 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
PKN1-202ENST00000342216 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
PKN1-202ENST00000342216 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
PKN1-202ENST00000342216 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
PKN1-202ENST00000342216 CAPN2P17655 700 aa18.25■□□□□ 0.51
PKN1-202ENST00000342216 KCNF1Q9H3M0 494 aa18.25■□□□□ 0.51
PKN1-202ENST00000342216 MYO5CQ9NQX4 1742 aa18.25■□□□□ 0.51
PKN1-202ENST00000342216 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.25■□□□□ 0.51
PKN1-202ENST00000342216 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
PKN1-202ENST00000342216 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
PKN1-202ENST00000342216 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
PKN1-202ENST00000342216 TIGD1Q96MW7 591 aa18.24■□□□□ 0.51
PKN1-202ENST00000342216 GABPB1Q06547 395 aaPredicted RBP18.24■□□□□ 0.51
PKN1-202ENST00000342216 NPC1L1Q9UHC9 1359 aa18.24■□□□□ 0.51
PKN1-202ENST00000342216 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
PKN1-202ENST00000342216 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
PKN1-202ENST00000342216 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
PKN1-202ENST00000342216 POLR3AO14802 1390 aaPredicted RBP18.23■□□□□ 0.51
PKN1-202ENST00000342216 CTIFO43310 598 aaKnown RBP18.23■□□□□ 0.51
PKN1-202ENST00000342216 KIAA1524Q8TCG1 905 aa18.23■□□□□ 0.51
PKN1-202ENST00000342216 ST7Q9NRC1 585 aa18.23■□□□□ 0.51
PKN1-202ENST00000342216 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
PKN1-202ENST00000342216 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
PKN1-202ENST00000342216 CCDC66A2RUB6 948 aa18.22■□□□□ 0.51
PKN1-202ENST00000342216 ST18O60284 1047 aa18.22■□□□□ 0.51
PKN1-202ENST00000342216 TERF2Q15554 542 aa18.22■□□□□ 0.51
PKN1-202ENST00000342216 MYOM1P52179 1685 aa18.22■□□□□ 0.51
PKN1-202ENST00000342216 MTHFSP49914 203 aa18.21■□□□□ 0.51
PKN1-202ENST00000342216 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.51
PKN1-202ENST00000342216 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
PKN1-202ENST00000342216 C16orf45Q96MC5 204 aaPredicted RBP18.21■□□□□ 0.51
PKN1-202ENST00000342216 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
PKN1-202ENST00000342216 RSPH4AQ5TD94 716 aa18.21■□□□□ 0.5
PKN1-202ENST00000342216 DDX41Q9UJV9 622 aaKnown RBP18.21■□□□□ 0.5
PKN1-202ENST00000342216 EIF2AK4Q9P2K8 1649 aaKnown RBP18.21■□□□□ 0.5
PKN1-202ENST00000342216 AP5Z1O43299 807 aa18.2■□□□□ 0.5
PKN1-202ENST00000342216 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
PKN1-202ENST00000342216 IRX3P78415 501 aaPredicted RBP18.19■□□□□ 0.5
PKN1-202ENST00000342216 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.19■□□□□ 0.5
PKN1-202ENST00000342216 V9GYY5 206 aaPredicted RBP18.19■□□□□ 0.5
PKN1-202ENST00000342216 APBB1O00213 710 aa18.18■□□□□ 0.5
PKN1-202ENST00000342216 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
PKN1-202ENST00000342216 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
PKN1-202ENST00000342216 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
PKN1-202ENST00000342216 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
PKN1-202ENST00000342216 SIRT2Q8IXJ6 389 aa18.17■□□□□ 0.5
PKN1-202ENST00000342216 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
PKN1-202ENST00000342216 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
PKN1-202ENST00000342216 KIF18AQ8NI77 898 aa18.16■□□□□ 0.5
PKN1-202ENST00000342216 KDM4AO75164 1064 aa18.16■□□□□ 0.5
PKN1-202ENST00000342216 PHF14O94880 888 aa18.16■□□□□ 0.5
PKN1-202ENST00000342216 NEK4P51957 841 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 TMX3Q96JJ7 454 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 PTGS1P23219 599 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 ZNF592Q92610 1267 aa18.15■□□□□ 0.5
PKN1-202ENST00000342216 BRD1O95696 1058 aa18.14■□□□□ 0.49
PKN1-202ENST00000342216 PLEKHM2Q8IWE5 1019 aa18.14■□□□□ 0.49
PKN1-202ENST00000342216 KANK1Q14678 1352 aa18.14■□□□□ 0.49
PKN1-202ENST00000342216 MORC2Q9Y6X9 1032 aaPredicted RBP18.14■□□□□ 0.49
PKN1-202ENST00000342216 RNF17Q9BXT8 1623 aaKnown RBP18.13■□□□□ 0.49
PKN1-202ENST00000342216 LRMPQ12912 555 aa18.13■□□□□ 0.49
PKN1-202ENST00000342216 GIMAP6Q6P9H5 292 aa18.13■□□□□ 0.49
PKN1-202ENST00000342216 KRT222Q8N1A0 295 aa18.13■□□□□ 0.49
PKN1-202ENST00000342216 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
PKN1-202ENST00000342216 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
PKN1-202ENST00000342216 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
PKN1-202ENST00000342216 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
PKN1-202ENST00000342216 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
PKN1-202ENST00000342216 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 ANKRD36BQ8N2N9 1353 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
PKN1-202ENST00000342216 CALCOCO1Q9P1Z2 691 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 NOS1P29475 1434 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 SHANK2Q9UPX8 1470 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 NPHP1O15259 732 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 DTNBO60941 627 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 TTC22Q5TAA0 569 aa18.11■□□□□ 0.49
PKN1-202ENST00000342216 TULP2O00295 520 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 TNNT1P13805 278 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
PKN1-202ENST00000342216 RTF1Q92541 710 aaKnown RBP18.1■□□□□ 0.49
PKN1-202ENST00000342216 SLC12A5Q9H2X9 1139 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 SLC20A2Q08357 652 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 KMT5BQ4FZB7 885 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 SECISBP2LQ93073 1101 aaKnown RBP18.1■□□□□ 0.49
PKN1-202ENST00000342216 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 CNPY2Q9Y2B0 182 aa18.1■□□□□ 0.49
PKN1-202ENST00000342216 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
PKN1-202ENST00000342216 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
PKN1-202ENST00000342216 CEP152O94986 1710 aa18.09■□□□□ 0.49
PKN1-202ENST00000342216 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms