RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
CAPN3-202ENST00000337571 LMO7Q8WWI1 1683 aa15.1■□□□□ 0.01
CAPN3-202ENST00000337571 C11orf95C9JLR9 678 aaPredicted RBP15.1■□□□□ 0.01
CAPN3-202ENST00000337571 SOX12O15370 315 aa15.1■□□□□ 0.01
CAPN3-202ENST00000337571 CRB1P82279 1406 aa15.09■□□□□ 0.01
CAPN3-202ENST00000337571 COL5A2P05997 1499 aaPredicted RBP15.09■□□□□ 0.01
CAPN3-202ENST00000337571 EZH2Q15910 746 aaKnown RBP15.09■□□□□ 0.01
CAPN3-202ENST00000337571 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
CAPN3-202ENST00000337571 AKAP12Q02952 1782 aa15.08■□□□□ 0
CAPN3-202ENST00000337571 SLIT3O75094 1523 aa15.07■□□□□ 0
CAPN3-202ENST00000337571 PIK3C2AO00443 1686 aa15.07■□□□□ 0
CAPN3-202ENST00000337571 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
CAPN3-202ENST00000337571 DDB1Q16531 1140 aa15.07■□□□□ 0
CAPN3-202ENST00000337571 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
CAPN3-202ENST00000337571 HDGFL2Q7Z4V5 671 aaPredicted RBP15.07■□□□□ 0
CAPN3-202ENST00000337571 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
CAPN3-202ENST00000337571 CAPN15O75808 1086 aa15.06■□□□□ 0
CAPN3-202ENST00000337571 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
CAPN3-202ENST00000337571 R3HDM1Q15032 1099 aaKnown RBP15.06■□□□□ 0
CAPN3-202ENST00000337571 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
CAPN3-202ENST00000337571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
CAPN3-202ENST00000337571 CAMKK2Q96RR4 588 aa15.06■□□□□ 0
CAPN3-202ENST00000337571 AXIN2Q9Y2T1 843 aa15.06■□□□□ 0
CAPN3-202ENST00000337571 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
CAPN3-202ENST00000337571 DISP2A7MBM2 1401 aa15.06■□□□□ 0
CAPN3-202ENST00000337571 CPSF1Q10570 1443 aaKnown RBP15.06■□□□□ 0
CAPN3-202ENST00000337571 SLC24A1O60721 1099 aa15.05■□□□□ -0
CAPN3-202ENST00000337571 NBPF14Q5TI25 921 aa15.05■□□□□ -0
CAPN3-202ENST00000337571 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
CAPN3-202ENST00000337571 TERF2IPQ9NYB0 399 aa15.05■□□□□ -0
CAPN3-202ENST00000337571 WDR17Q8IZU2 1322 aa15.05■□□□□ -0
CAPN3-202ENST00000337571 PARD3Q8TEW0 1356 aa15.05■□□□□ -0
CAPN3-202ENST00000337571 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
CAPN3-202ENST00000337571 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
CAPN3-202ENST00000337571 SLC12A5Q9H2X9 1139 aa15.02■□□□□ -0
CAPN3-202ENST00000337571 COL18A1P39060 1754 aa15.02□□□□□ -0.01
CAPN3-202ENST00000337571 RGPD5Q99666 1765 aa15.02□□□□□ -0.01
CAPN3-202ENST00000337571 EXOC5O00471 708 aa15.01□□□□□ -0.01
CAPN3-202ENST00000337571 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
CAPN3-202ENST00000337571 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
CAPN3-202ENST00000337571 OVOS2A0A0J9YW53 1432 aa15□□□□□ -0.01
CAPN3-202ENST00000337571 OVOS2Q6IE36 1432 aa15□□□□□ -0.01
CAPN3-202ENST00000337571 MON2Q7Z3U7 1717 aa15□□□□□ -0.01
CAPN3-202ENST00000337571 NME9Q86XW9 330 aa15□□□□□ -0.01
CAPN3-202ENST00000337571 LRP5O75197 1615 aa14.99□□□□□ -0.01
CAPN3-202ENST00000337571 USP31Q70CQ4 1352 aa14.98□□□□□ -0.01
CAPN3-202ENST00000337571 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
CAPN3-202ENST00000337571 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
CAPN3-202ENST00000337571 CCDC7Q96M83 1385 aa14.98□□□□□ -0.01
CAPN3-202ENST00000337571 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
CAPN3-202ENST00000337571 EDC4Q6P2E9 1401 aaKnown RBP14.97□□□□□ -0.01
CAPN3-202ENST00000337571 NFAT5O94916 1531 aa14.97□□□□□ -0.01
CAPN3-202ENST00000337571 LRRC37A3O60309 1634 aa14.96□□□□□ -0.01
CAPN3-202ENST00000337571 PLSCR1O15162 318 aa14.96□□□□□ -0.01
CAPN3-202ENST00000337571 MARCH10Q8NA82 808 aaPredicted RBP14.96□□□□□ -0.01
CAPN3-202ENST00000337571 SBF2Q86WG5 1849 aa14.96□□□□□ -0.01
CAPN3-202ENST00000337571 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
CAPN3-202ENST00000337571 WNK3Q9BYP7 1800 aa14.95□□□□□ -0.02
CAPN3-202ENST00000337571 ABCC6O95255 1503 aa14.95□□□□□ -0.02
CAPN3-202ENST00000337571 LTN1O94822 1766 aa14.95□□□□□ -0.02
CAPN3-202ENST00000337571 RREB1Q92766 1687 aa14.94□□□□□ -0.02
CAPN3-202ENST00000337571 ANKRD24Q8TF21 1146 aa14.94□□□□□ -0.02
CAPN3-202ENST00000337571 COG3Q96JB2 828 aa14.94□□□□□ -0.02
CAPN3-202ENST00000337571 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
CAPN3-202ENST00000337571 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
CAPN3-202ENST00000337571 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
CAPN3-202ENST00000337571 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
CAPN3-202ENST00000337571 IL2RBP14784 551 aa14.93□□□□□ -0.02
CAPN3-202ENST00000337571 TMF1P82094 1093 aa14.93□□□□□ -0.02
CAPN3-202ENST00000337571 TESK2Q96S53 571 aa14.93□□□□□ -0.02
CAPN3-202ENST00000337571 ERBB3P21860 1342 aa14.92□□□□□ -0.02
CAPN3-202ENST00000337571 USP54Q70EL1 1684 aa14.92□□□□□ -0.02
CAPN3-202ENST00000337571 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-202ENST00000337571 BCL9O00512 1426 aa14.91□□□□□ -0.02
CAPN3-202ENST00000337571 CDCA8Q53HL2 280 aa14.9□□□□□ -0.02
CAPN3-202ENST00000337571 PTF1AQ7RTS3 328 aa14.9□□□□□ -0.02
CAPN3-202ENST00000337571 IP6K1Q92551 441 aa14.9□□□□□ -0.02
CAPN3-202ENST00000337571 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-202ENST00000337571 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
CAPN3-202ENST00000337571 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
CAPN3-202ENST00000337571 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
CAPN3-202ENST00000337571 KCNQ2O43526 872 aa14.89□□□□□ -0.03
CAPN3-202ENST00000337571 AMPHP49418 695 aa14.89□□□□□ -0.03
CAPN3-202ENST00000337571 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-202ENST00000337571 TNS2Q63HR2 1409 aa14.88□□□□□ -0.03
CAPN3-202ENST00000337571 USP47Q96K76 1375 aa14.87□□□□□ -0.03
CAPN3-202ENST00000337571 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
CAPN3-202ENST00000337571 ACSBG1Q96GR2 724 aa14.87□□□□□ -0.03
CAPN3-202ENST00000337571 PCGF6Q9BYE7 350 aa14.87□□□□□ -0.03
CAPN3-202ENST00000337571 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
CAPN3-202ENST00000337571 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
CAPN3-202ENST00000337571 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
CAPN3-202ENST00000337571 PROM2Q8N271 834 aa14.86□□□□□ -0.03
CAPN3-202ENST00000337571 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
CAPN3-202ENST00000337571 DSG3P32926 999 aa14.85□□□□□ -0.03
CAPN3-202ENST00000337571 DDX54Q8TDD1 881 aaKnown RBP14.85□□□□□ -0.03
CAPN3-202ENST00000337571 HOXC9P31274 260 aa14.84□□□□□ -0.03
CAPN3-202ENST00000337571 MAP3K19Q56UN5 1328 aa14.84□□□□□ -0.03
CAPN3-202ENST00000337571 FAM208AQ9UK61 1670 aaKnown RBP14.84□□□□□ -0.03
CAPN3-202ENST00000337571 FYB1O15117 783 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms