RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 USP47Q96K76 1375 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 HMOX1P09601 288 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
CACNA1C-202ENST00000335762 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 IMMTQ16891 758 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 K7ELQ4 463 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 CUX2O14529 1486 aa12.33□□□□□ -0.44
CACNA1C-202ENST00000335762 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 FAM107BQ9H098 131 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 CBX1P83916 185 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 PSME1Q06323 249 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 NACAP1Q9BZK3 213 aa12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 RNF187Q5TA31 235 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-202ENST00000335762 CCDC158Q5M9N0 1113 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 SFPQP23246 707 aaKnown RBP eCLIP12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 IFFO1Q0D2I5 559 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 CCDC30Q5VVM6 783 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 ZSCAN12O43309 604 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
CACNA1C-202ENST00000335762 GPATCH11Q8N954 259 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 CCDC175P0C221 793 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 SPA17Q15506 151 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 KIF18AQ8NI77 898 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 MCM3P25205 808 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 ANAPC15P60006 121 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 MCM4P33991 863 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 LUZP1Q86V48 1076 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-202ENST00000335762 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 GNL3LQ9NVN8 582 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 CDKL5O76039 1030 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 URI1O94763 535 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 TTC39AQ5SRH9 613 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 NLRP2Q9NX02 1062 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 PPP6R1Q9UPN7 881 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 SPECC1Q5M775 1068 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 BLOC1S2Q6QNY1 142 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 KIF5CO60282 957 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 GNAI2P04899 355 aa12.29□□□□□ -0.44
CACNA1C-202ENST00000335762 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 MAP3K11Q16584 847 aa12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 RBM25P49756 843 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 GCOM1H8Y6P7 765 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 POLR3GO15318 223 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 MYZAPP0CAP1 466 aa12.28□□□□□ -0.44
CACNA1C-202ENST00000335762 SOGA1O94964 1423 aa12.27□□□□□ -0.44
CACNA1C-202ENST00000335762 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-202ENST00000335762 CNNM1Q9NRU3 951 aa12.27□□□□□ -0.44
CACNA1C-202ENST00000335762 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-202ENST00000335762 HOOK3Q86VS8 718 aa12.27□□□□□ -0.45
CACNA1C-202ENST00000335762 PAFAH1B1P43034 410 aa12.27□□□□□ -0.45
CACNA1C-202ENST00000335762 PPP1R12BO60237 982 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-202ENST00000335762 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
CACNA1C-202ENST00000335762 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
CACNA1C-202ENST00000335762 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
CACNA1C-202ENST00000335762 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
CACNA1C-202ENST00000335762 BCCIPQ9P287 314 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1C-202ENST00000335762 TCP11L2Q8N4U5 519 aa12.26□□□□□ -0.45
CACNA1C-202ENST00000335762 PDRG1Q9NUG6 133 aa12.26□□□□□ -0.45
CACNA1C-202ENST00000335762 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 CASQ1P31415 396 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 MATR3P43243 847 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 VPS36Q86VN1 386 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 SYCE3A1L190 88 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 SPECC1LQ69YQ0 1117 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 BACH2Q9BYV9 841 aa12.25□□□□□ -0.45
CACNA1C-202ENST00000335762 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
CACNA1C-202ENST00000335762 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
CACNA1C-202ENST00000335762 TRIM21P19474 475 aaKnown RBP12.24□□□□□ -0.45
CACNA1C-202ENST00000335762 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms