RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
GDF3-201ENST00000329913 USP6P35125 1406 aa13.6□□□□□ -0.23
GDF3-201ENST00000329913 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
GDF3-201ENST00000329913 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
GDF3-201ENST00000329913 PARP4Q9UKK3 1724 aaKnown RBP13.6□□□□□ -0.23
GDF3-201ENST00000329913 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
GDF3-201ENST00000329913 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
GDF3-201ENST00000329913 PARD3Q8TEW0 1356 aa13.59□□□□□ -0.23
GDF3-201ENST00000329913 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
GDF3-201ENST00000329913 CRB1P82279 1406 aa13.59□□□□□ -0.23
GDF3-201ENST00000329913 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
GDF3-201ENST00000329913 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
GDF3-201ENST00000329913 UTRNP46939 3433 aa13.59□□□□□ -0.23
GDF3-201ENST00000329913 OVOS2A0A0G2JMS6 1433 aa13.58□□□□□ -0.24
GDF3-201ENST00000329913 OVOS2A0A0J9YW53 1432 aa13.58□□□□□ -0.24
GDF3-201ENST00000329913 OVOS2Q6IE36 1432 aa13.58□□□□□ -0.24
GDF3-201ENST00000329913 YY1P25490 414 aa13.58□□□□□ -0.24
GDF3-201ENST00000329913 SLIT3O75094 1523 aa13.58□□□□□ -0.24
GDF3-201ENST00000329913 ZBTB7AO95365 584 aa13.57□□□□□ -0.24
GDF3-201ENST00000329913 DDB1Q16531 1140 aa13.57□□□□□ -0.24
GDF3-201ENST00000329913 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
GDF3-201ENST00000329913 SIN3AQ96ST3 1273 aa13.57□□□□□ -0.24
GDF3-201ENST00000329913 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
GDF3-201ENST00000329913 SPON1Q9HCB6 807 aa13.56□□□□□ -0.24
GDF3-201ENST00000329913 COL18A1P39060 1754 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 KCNQ2O43526 872 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 CSB-PGBD3P0DP91 1061 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
GDF3-201ENST00000329913 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 RGPD5Q99666 1765 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 SBF2Q86WG5 1849 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
GDF3-201ENST00000329913 CPSF1Q10570 1443 aaKnown RBP13.55□□□□□ -0.24
GDF3-201ENST00000329913 POLA2Q14181 598 aa13.54□□□□□ -0.24
GDF3-201ENST00000329913 PROM2Q8N271 834 aa13.54□□□□□ -0.24
GDF3-201ENST00000329913 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
GDF3-201ENST00000329913 NEUROD1Q13562 356 aa13.53□□□□□ -0.24
GDF3-201ENST00000329913 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
GDF3-201ENST00000329913 WDR17Q8IZU2 1322 aa13.53□□□□□ -0.24
GDF3-201ENST00000329913 MYOM1P52179 1685 aa13.53□□□□□ -0.24
GDF3-201ENST00000329913 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.25
GDF3-201ENST00000329913 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
GDF3-201ENST00000329913 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
GDF3-201ENST00000329913 ARHGEF25Q86VW2 580 aa13.51□□□□□ -0.25
GDF3-201ENST00000329913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
GDF3-201ENST00000329913 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
GDF3-201ENST00000329913 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
GDF3-201ENST00000329913 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
GDF3-201ENST00000329913 NFAT5O94916 1531 aa13.49□□□□□ -0.25
GDF3-201ENST00000329913 DSG3P32926 999 aa13.49□□□□□ -0.25
GDF3-201ENST00000329913 PLSCR1O15162 318 aa13.48□□□□□ -0.25
GDF3-201ENST00000329913 ABCB7O75027 752 aa13.48□□□□□ -0.25
GDF3-201ENST00000329913 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
GDF3-201ENST00000329913 NME9Q86XW9 330 aa13.48□□□□□ -0.25
GDF3-201ENST00000329913 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
GDF3-201ENST00000329913 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
GDF3-201ENST00000329913 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
GDF3-201ENST00000329913 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
GDF3-201ENST00000329913 PTGER2P43116 358 aa13.47□□□□□ -0.25
GDF3-201ENST00000329913 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
GDF3-201ENST00000329913 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
GDF3-201ENST00000329913 STK32BQ9NY57 414 aa13.46□□□□□ -0.25
GDF3-201ENST00000329913 TNS2Q63HR2 1409 aa13.46□□□□□ -0.26
GDF3-201ENST00000329913 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
GDF3-201ENST00000329913 GOLGB1Q14789 3259 aaKnown RBP13.45□□□□□ -0.26
GDF3-201ENST00000329913 EXOC5O00471 708 aa13.45□□□□□ -0.26
GDF3-201ENST00000329913 FHDC1Q9C0D6 1143 aaPredicted RBP13.45□□□□□ -0.26
GDF3-201ENST00000329913 SLC15A2Q16348 729 aa13.44□□□□□ -0.26
GDF3-201ENST00000329913 KCNH5Q8NCM2 988 aa13.44□□□□□ -0.26
GDF3-201ENST00000329913 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
GDF3-201ENST00000329913 KCNQ4P56696 695 aa13.43□□□□□ -0.26
GDF3-201ENST00000329913 ZNF827Q17R98 1081 aa13.43□□□□□ -0.26
GDF3-201ENST00000329913 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
GDF3-201ENST00000329913 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
GDF3-201ENST00000329913 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
GDF3-201ENST00000329913 TTC21AQ8NDW8 1320 aa13.42□□□□□ -0.26
GDF3-201ENST00000329913 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
GDF3-201ENST00000329913 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
GDF3-201ENST00000329913 NHSQ6T4R5 1651 aa13.42□□□□□ -0.26
GDF3-201ENST00000329913 ERBB3P21860 1342 aa13.41□□□□□ -0.26
GDF3-201ENST00000329913 LTN1O94822 1766 aa13.41□□□□□ -0.26
GDF3-201ENST00000329913 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
GDF3-201ENST00000329913 FBLN1P23142 703 aa13.41□□□□□ -0.26
GDF3-201ENST00000329913 ANKRD24Q8TF21 1146 aa13.41□□□□□ -0.26
GDF3-201ENST00000329913 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
GDF3-201ENST00000329913 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
GDF3-201ENST00000329913 CCDC7Q96M83 1385 aa13.41□□□□□ -0.26
GDF3-201ENST00000329913 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
GDF3-201ENST00000329913 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
GDF3-201ENST00000329913 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
GDF3-201ENST00000329913 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
GDF3-201ENST00000329913 BCL9O00512 1426 aa13.39□□□□□ -0.27
GDF3-201ENST00000329913 ABCC6O95255 1503 aa13.39□□□□□ -0.27
GDF3-201ENST00000329913 PAPPAQ13219 1627 aa13.39□□□□□ -0.27
GDF3-201ENST00000329913 BTAF1O14981 1849 aa13.39□□□□□ -0.27
GDF3-201ENST00000329913 ZNF784Q8NCA9 323 aaPredicted RBP13.39□□□□□ -0.27
GDF3-201ENST00000329913 IL2RBP14784 551 aa13.38□□□□□ -0.27
GDF3-201ENST00000329913 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
GDF3-201ENST00000329913 DDX54Q8TDD1 881 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms