RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 COL5A2P05997 1499 aaPredicted RBP23.69■■□□□ 1.38
PUF60-201ENST00000313352 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
PUF60-201ENST00000313352 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
PUF60-201ENST00000313352 EVA1CP58658 441 aa23.68■■□□□ 1.38
PUF60-201ENST00000313352 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
PUF60-201ENST00000313352 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
PUF60-201ENST00000313352 LTN1O94822 1766 aa23.68■■□□□ 1.38
PUF60-201ENST00000313352 FAM98CQ17RN3 349 aaKnown RBP23.67■■□□□ 1.38
PUF60-201ENST00000313352 CCDC7Q96M83 1385 aa23.66■■□□□ 1.38
PUF60-201ENST00000313352 SPATA31A1Q5TZJ5 1347 aa23.65■■□□□ 1.38
PUF60-201ENST00000313352 RRS1Q15050 365 aaKnown RBP23.65■■□□□ 1.38
PUF60-201ENST00000313352 SEPT12Q8IYM1 358 aa23.63■■□□□ 1.37
PUF60-201ENST00000313352 MAP3K19Q56UN5 1328 aa23.63■■□□□ 1.37
PUF60-201ENST00000313352 ONECUT3O60422 494 aaPredicted RBP23.61■■□□□ 1.37
PUF60-201ENST00000313352 BRWD3Q6RI45 1802 aa23.61■■□□□ 1.37
PUF60-201ENST00000313352 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
PUF60-201ENST00000313352 EP400Q96L91 3159 aa23.6■■□□□ 1.37
PUF60-201ENST00000313352 A0A0G2JS52 829 aa23.59■■□□□ 1.37
PUF60-201ENST00000313352 MYT1Q01538 1121 aa23.59■■□□□ 1.37
PUF60-201ENST00000313352 TOM1L2Q6ZVM7 507 aa23.58■■□□□ 1.37
PUF60-201ENST00000313352 WDR17Q8IZU2 1322 aa23.58■■□□□ 1.36
PUF60-201ENST00000313352 CRB1P82279 1406 aa23.57■■□□□ 1.36
PUF60-201ENST00000313352 TNNT2P45379 298 aaPredicted RBP23.57■■□□□ 1.36
PUF60-201ENST00000313352 PER1O15534 1290 aaPredicted RBP23.56■■□□□ 1.36
PUF60-201ENST00000313352 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
PUF60-201ENST00000313352 IP6K1Q92551 441 aa23.56■■□□□ 1.36
PUF60-201ENST00000313352 LTV1Q96GA3 475 aaPredicted RBP23.56■■□□□ 1.36
PUF60-201ENST00000313352 EMILIN1Q9Y6C2 1016 aa23.56■■□□□ 1.36
PUF60-201ENST00000313352 PEAK1Q9H792 1746 aa23.56■■□□□ 1.36
PUF60-201ENST00000313352 THSD7AQ9UPZ6 1657 aa23.55■■□□□ 1.36
PUF60-201ENST00000313352 HOXC9P31274 260 aa23.55■■□□□ 1.36
PUF60-201ENST00000313352 FAM182BQ5T319 152 aa23.55■■□□□ 1.36
PUF60-201ENST00000313352 TCP11L2Q8N4U5 519 aa23.55■■□□□ 1.36
PUF60-201ENST00000313352 ERBB3P21860 1342 aa23.55■■□□□ 1.36
PUF60-201ENST00000313352 AMPHP49418 695 aa23.54■■□□□ 1.36
PUF60-201ENST00000313352 ANKRD24Q8TF21 1146 aa23.54■■□□□ 1.36
PUF60-201ENST00000313352 KNSTRNQ9Y448 316 aa23.54■■□□□ 1.36
PUF60-201ENST00000313352 ABCC6O95255 1503 aa23.53■■□□□ 1.36
PUF60-201ENST00000313352 AMER1Q5JTC6 1135 aaPredicted RBP23.53■■□□□ 1.36
PUF60-201ENST00000313352 ANKRD26Q9UPS8 1709 aa23.53■■□□□ 1.36
PUF60-201ENST00000313352 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.36
PUF60-201ENST00000313352 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
PUF60-201ENST00000313352 UPF1Q92900 1129 aaKnown RBP eCLIP23.52■■□□□ 1.36
PUF60-201ENST00000313352 HSP90AB2PQ58FF8 381 aa23.51■■□□□ 1.35
PUF60-201ENST00000313352 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
PUF60-201ENST00000313352 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
PUF60-201ENST00000313352 KRT27Q7Z3Y8 459 aa23.49■■□□□ 1.35
PUF60-201ENST00000313352 NLRP2Q9NX02 1062 aa23.49■■□□□ 1.35
PUF60-201ENST00000313352 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
PUF60-201ENST00000313352 POLKQ9UBT6 870 aa23.49■■□□□ 1.35
PUF60-201ENST00000313352 MAP2P11137 1827 aaKnown RBP23.49■■□□□ 1.35
PUF60-201ENST00000313352 RGPD2P0DJD1 1756 aa23.49■■□□□ 1.35
PUF60-201ENST00000313352 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
PUF60-201ENST00000313352 THRAP3Q9Y2W1 955 aaKnown RBP23.47■■□□□ 1.35
PUF60-201ENST00000313352 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
PUF60-201ENST00000313352 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
PUF60-201ENST00000313352 RTL1A6NKG5 1358 aa23.44■■□□□ 1.34
PUF60-201ENST00000313352 NSD2O96028 1365 aa23.44■■□□□ 1.34
PUF60-201ENST00000313352 WNK3Q9BYP7 1800 aa23.44■■□□□ 1.34
PUF60-201ENST00000313352 FLT4P35916 1363 aa23.44■■□□□ 1.34
PUF60-201ENST00000313352 DISP2A7MBM2 1401 aa23.43■■□□□ 1.34
PUF60-201ENST00000313352 USHBP1Q8N6Y0 703 aa23.43■■□□□ 1.34
PUF60-201ENST00000313352 INSRP06213 1382 aa23.43■■□□□ 1.34
PUF60-201ENST00000313352 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
PUF60-201ENST00000313352 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
PUF60-201ENST00000313352 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
PUF60-201ENST00000313352 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
PUF60-201ENST00000313352 FAM208AQ9UK61 1670 aaKnown RBP23.39■■□□□ 1.34
PUF60-201ENST00000313352 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
PUF60-201ENST00000313352 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
PUF60-201ENST00000313352 DDB1Q16531 1140 aa23.38■■□□□ 1.33
PUF60-201ENST00000313352 IL2RBP14784 551 aa23.36■■□□□ 1.33
PUF60-201ENST00000313352 MARCH10Q8NA82 808 aaPredicted RBP23.36■■□□□ 1.33
PUF60-201ENST00000313352 EIF4A2Q14240 407 aaKnown RBP23.34■■□□□ 1.33
PUF60-201ENST00000313352 SMG6Q86US8 1419 aaKnown RBP23.34■■□□□ 1.33
PUF60-201ENST00000313352 MEGF6O75095 1541 aa23.33■■□□□ 1.33
PUF60-201ENST00000313352 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
PUF60-201ENST00000313352 EYA1Q99502 592 aa23.33■■□□□ 1.32
PUF60-201ENST00000313352 NPC1L1Q9UHC9 1359 aa23.32■■□□□ 1.32
PUF60-201ENST00000313352 EXOC5O00471 708 aa23.32■■□□□ 1.32
PUF60-201ENST00000313352 MTHFSP49914 203 aa23.31■■□□□ 1.32
PUF60-201ENST00000313352 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
PUF60-201ENST00000313352 TRIM37O94972 964 aa23.31■■□□□ 1.32
PUF60-201ENST00000313352 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
PUF60-201ENST00000313352 TNS2Q63HR2 1409 aa23.3■■□□□ 1.32
PUF60-201ENST00000313352 PTF1AQ7RTS3 328 aa23.3■■□□□ 1.32
PUF60-201ENST00000313352 FAM196AQ6ZSG2 479 aa23.29■■□□□ 1.32
PUF60-201ENST00000313352 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
PUF60-201ENST00000313352 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
PUF60-201ENST00000313352 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
PUF60-201ENST00000313352 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
PUF60-201ENST00000313352 TNS1Q9HBL0 1735 aaKnown RBP23.24■■□□□ 1.31
PUF60-201ENST00000313352 IL13P35225 146 aa23.23■■□□□ 1.31
PUF60-201ENST00000313352 CCDC125Q86Z20 511 aa23.23■■□□□ 1.31
PUF60-201ENST00000313352 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
PUF60-201ENST00000313352 SBF2Q86WG5 1849 aa23.23■■□□□ 1.31
PUF60-201ENST00000313352 RAPGEF4Q8WZA2 1011 aa23.22■■□□□ 1.31
PUF60-201ENST00000313352 KCNQ2O43526 872 aa23.22■■□□□ 1.31
PUF60-201ENST00000313352 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
PUF60-201ENST00000313352 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms