RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
RDH13-201ENST00000291892 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
RDH13-201ENST00000291892 NEK4P51957 841 aa16.49■□□□□ 0.23
RDH13-201ENST00000291892 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
RDH13-201ENST00000291892 ABCA8O94911 1581 aa16.49■□□□□ 0.23
RDH13-201ENST00000291892 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
RDH13-201ENST00000291892 C16orf45Q96MC5 204 aaPredicted RBP16.49■□□□□ 0.23
RDH13-201ENST00000291892 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
RDH13-201ENST00000291892 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
RDH13-201ENST00000291892 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
RDH13-201ENST00000291892 TAF3Q5VWG9 929 aa16.48■□□□□ 0.23
RDH13-201ENST00000291892 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
RDH13-201ENST00000291892 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
RDH13-201ENST00000291892 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.48■□□□□ 0.23
RDH13-201ENST00000291892 V9GYY5 206 aaPredicted RBP16.48■□□□□ 0.23
RDH13-201ENST00000291892 IPO8O15397 1037 aaKnown RBP16.48■□□□□ 0.23
RDH13-201ENST00000291892 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
RDH13-201ENST00000291892 SYNMO15061 1565 aa16.47■□□□□ 0.23
RDH13-201ENST00000291892 ZNF592Q92610 1267 aa16.47■□□□□ 0.23
RDH13-201ENST00000291892 NCBP1Q09161 790 aaKnown RBP16.47■□□□□ 0.23
RDH13-201ENST00000291892 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
RDH13-201ENST00000291892 OGFRQ9NZT2 677 aa16.47■□□□□ 0.23
RDH13-201ENST00000291892 PPIP5K1Q6PFW1 1433 aa16.47■□□□□ 0.23
RDH13-201ENST00000291892 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
RDH13-201ENST00000291892 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
RDH13-201ENST00000291892 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.23
RDH13-201ENST00000291892 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
RDH13-201ENST00000291892 ANKRD7Q92527 254 aa16.46■□□□□ 0.23
RDH13-201ENST00000291892 SHANK2Q9UPX8 1470 aa16.46■□□□□ 0.23
RDH13-201ENST00000291892 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.22
RDH13-201ENST00000291892 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
RDH13-201ENST00000291892 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
RDH13-201ENST00000291892 KCNF1Q9H3M0 494 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 NPHP1O15259 732 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 USP48Q86UV5 1035 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 ST7Q9NRC1 585 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 TMX3Q96JJ7 454 aa16.45■□□□□ 0.22
RDH13-201ENST00000291892 TRIM6-TRIM34B2RNG4 842 aa16.44■□□□□ 0.22
RDH13-201ENST00000291892 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
RDH13-201ENST00000291892 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
RDH13-201ENST00000291892 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
RDH13-201ENST00000291892 SPTLC3Q9NUV7 552 aa16.44■□□□□ 0.22
RDH13-201ENST00000291892 GIMAP6Q6P9H5 292 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 PHF14O94880 888 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 KIAA1524Q8TCG1 905 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 SCAF11Q99590 1463 aaKnown RBP16.43■□□□□ 0.22
RDH13-201ENST00000291892 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
RDH13-201ENST00000291892 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
RDH13-201ENST00000291892 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
RDH13-201ENST00000291892 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 FEZ1Q99689 392 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
RDH13-201ENST00000291892 AP5Z1O43299 807 aa16.42■□□□□ 0.22
RDH13-201ENST00000291892 ZBTB7BO15156 539 aaPredicted RBP16.42■□□□□ 0.22
RDH13-201ENST00000291892 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
RDH13-201ENST00000291892 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
RDH13-201ENST00000291892 PTGS1P23219 599 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
RDH13-201ENST00000291892 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 SDSP20132 328 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 LRMPQ12912 555 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
RDH13-201ENST00000291892 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
RDH13-201ENST00000291892 CCDC66A2RUB6 948 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 FIBPO43427 364 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
RDH13-201ENST00000291892 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 KDM4AO75164 1064 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 CNPY2Q9Y2B0 182 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
RDH13-201ENST00000291892 ARHGAP31Q2M1Z3 1444 aa16.39■□□□□ 0.21
RDH13-201ENST00000291892 LAMC1P11047 1609 aa16.39■□□□□ 0.21
RDH13-201ENST00000291892 BRD1O95696 1058 aa16.39■□□□□ 0.21
RDH13-201ENST00000291892 MYOM1P52179 1685 aa16.39■□□□□ 0.21
RDH13-201ENST00000291892 TERF2Q15554 542 aa16.39■□□□□ 0.21
RDH13-201ENST00000291892 CASC1Q6TDU7 716 aa16.39■□□□□ 0.21
RDH13-201ENST00000291892 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
RDH13-201ENST00000291892 GABPB1Q06547 395 aaPredicted RBP16.38■□□□□ 0.21
RDH13-201ENST00000291892 SHROOM2Q13796 1616 aa16.38■□□□□ 0.21
RDH13-201ENST00000291892 CAPN2P17655 700 aa16.38■□□□□ 0.21
RDH13-201ENST00000291892 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
RDH13-201ENST00000291892 SYCP2Q9BX26 1530 aa16.38■□□□□ 0.21
RDH13-201ENST00000291892 CTIFO43310 598 aaKnown RBP16.37■□□□□ 0.21
RDH13-201ENST00000291892 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
RDH13-201ENST00000291892 TTC37Q6PGP7 1564 aa16.37■□□□□ 0.21
RDH13-201ENST00000291892 TNNT1P13805 278 aa16.37■□□□□ 0.21
RDH13-201ENST00000291892 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
RDH13-201ENST00000291892 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
RDH13-201ENST00000291892 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
RDH13-201ENST00000291892 CCDC183Q5T5S1 534 aa16.36■□□□□ 0.21
RDH13-201ENST00000291892 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
RDH13-201ENST00000291892 UVSSAQ2YD98 709 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms