RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 EIF4A2Q14240 407 aaKnown RBP25.18■■□□□ 1.62
PDLIM3-202ENST00000284770 CPDO75976 1380 aa25.18■■□□□ 1.62
PDLIM3-202ENST00000284770 ZBTB7CA1YPR0 619 aa25.18■■□□□ 1.62
PDLIM3-202ENST00000284770 U2AF1L5P0DN76 240 aaPredicted RBP25.18■■□□□ 1.62
PDLIM3-202ENST00000284770 U2AF1Q01081 240 aaKnown RBP eCLIP25.18■■□□□ 1.62
PDLIM3-202ENST00000284770 HAP1P54257 671 aaPredicted RBP25.17■■□□□ 1.62
PDLIM3-202ENST00000284770 COL22A1Q8NFW1 1626 aaPredicted RBP25.16■■□□□ 1.62
PDLIM3-202ENST00000284770 BLMP54132 1417 aaPredicted RBP25.16■■□□□ 1.62
PDLIM3-202ENST00000284770 ABCA3Q99758 1704 aa25.14■■□□□ 1.62
PDLIM3-202ENST00000284770 KIAA0232Q92628 1395 aa25.14■■□□□ 1.62
PDLIM3-202ENST00000284770 HNRNPUQ00839 825 aaKnown RBP eCLIP25.14■■□□□ 1.62
PDLIM3-202ENST00000284770 AXIN2Q9Y2T1 843 aa25.11■■□□□ 1.61
PDLIM3-202ENST00000284770 ABCC6O95255 1503 aa25.1■■□□□ 1.61
PDLIM3-202ENST00000284770 FCHSD2O94868 740 aa25.1■■□□□ 1.61
PDLIM3-202ENST00000284770 PRDM11Q9NQV5 511 aa25.1■■□□□ 1.61
PDLIM3-202ENST00000284770 CHRNA2Q15822 529 aa25.09■■□□□ 1.61
PDLIM3-202ENST00000284770 CCDC146Q8IYE0 955 aa25.09■■□□□ 1.61
PDLIM3-202ENST00000284770 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
PDLIM3-202ENST00000284770 COL18A1P39060 1754 aa25.08■■□□□ 1.61
PDLIM3-202ENST00000284770 JCADQ9P266 1359 aa25.08■■□□□ 1.61
PDLIM3-202ENST00000284770 RUNDC1Q96C34 613 aa25.08■■□□□ 1.6
PDLIM3-202ENST00000284770 PNNQ9H307 717 aaKnown RBP25.08■■□□□ 1.6
PDLIM3-202ENST00000284770 EYA1Q99502 592 aa25.07■■□□□ 1.6
PDLIM3-202ENST00000284770 RGPD1P0DJD0 1748 aa25.07■■□□□ 1.6
PDLIM3-202ENST00000284770 HMOX1P09601 288 aa25.06■■□□□ 1.6
PDLIM3-202ENST00000284770 ANKRD24Q8TF21 1146 aa25.06■■□□□ 1.6
PDLIM3-202ENST00000284770 HSPA1LP34931 641 aa25.05■■□□□ 1.6
PDLIM3-202ENST00000284770 PLEKHF1Q96S99 279 aa25.05■■□□□ 1.6
PDLIM3-202ENST00000284770 RSPH6AQ9H0K4 717 aa25.05■■□□□ 1.6
PDLIM3-202ENST00000284770 IGSF1Q8N6C5 1336 aa25.05■■□□□ 1.6
PDLIM3-202ENST00000284770 SULT6B1Q6IMI4 303 aa25.04■■□□□ 1.6
PDLIM3-202ENST00000284770 ERBB3P21860 1342 aa25.04■■□□□ 1.6
PDLIM3-202ENST00000284770 FAM83GA6ND36 823 aa25.03■■□□□ 1.6
PDLIM3-202ENST00000284770 ZBED9Q6R2W3 1325 aa25.03■■□□□ 1.6
PDLIM3-202ENST00000284770 APAF1O14727 1248 aa25.02■■□□□ 1.6
PDLIM3-202ENST00000284770 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
PDLIM3-202ENST00000284770 AEBP1Q8IUX7 1158 aa25.02■■□□□ 1.6
PDLIM3-202ENST00000284770 RGPD5Q99666 1765 aa25.01■■□□□ 1.59
PDLIM3-202ENST00000284770 KDRP35968 1356 aa25.01■■□□□ 1.59
PDLIM3-202ENST00000284770 LMO7Q8WWI1 1683 aa25.01■■□□□ 1.59
PDLIM3-202ENST00000284770 SENP3-EIF4A1A0A087X0R7 540 aa25■■□□□ 1.59
PDLIM3-202ENST00000284770 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
PDLIM3-202ENST00000284770 NBPF4Q96M43 638 aa25■■□□□ 1.59
PDLIM3-202ENST00000284770 CAMTA1Q9Y6Y1 1673 aa25■■□□□ 1.59
PDLIM3-202ENST00000284770 NUTM2BA6NNL0 878 aaPredicted RBP24.99■■□□□ 1.59
PDLIM3-202ENST00000284770 NUTM2EB1AL46 878 aaPredicted RBP24.99■■□□□ 1.59
PDLIM3-202ENST00000284770 NUTM2AQ8IVF1 878 aaPredicted RBP24.99■■□□□ 1.59
PDLIM3-202ENST00000284770 TCP11L2Q8N4U5 519 aa24.99■■□□□ 1.59
PDLIM3-202ENST00000284770 MAPK8IP3Q9UPT6 1336 aa24.99■■□□□ 1.59
PDLIM3-202ENST00000284770 NEFMP07197 916 aa24.98■■□□□ 1.59
PDLIM3-202ENST00000284770 SPATA31A6Q5VVP1 1343 aa24.97■■□□□ 1.59
PDLIM3-202ENST00000284770 ADAMTS2O95450 1211 aa24.97■■□□□ 1.59
PDLIM3-202ENST00000284770 NGEFQ8N5V2 710 aa24.97■■□□□ 1.59
PDLIM3-202ENST00000284770 CSB-PGBD3P0DP91 1061 aa24.96■■□□□ 1.59
PDLIM3-202ENST00000284770 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
PDLIM3-202ENST00000284770 COL14A1Q05707 1796 aaKnown RBP24.96■■□□□ 1.59
PDLIM3-202ENST00000284770 PHACTR3Q96KR7 559 aa24.95■■□□□ 1.59
PDLIM3-202ENST00000284770 SALL2Q9Y467 1007 aaPredicted RBP24.95■■□□□ 1.59
PDLIM3-202ENST00000284770 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
PDLIM3-202ENST00000284770 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
PDLIM3-202ENST00000284770 NLRP2Q9NX02 1062 aa24.94■■□□□ 1.58
PDLIM3-202ENST00000284770 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
PDLIM3-202ENST00000284770 WDR17Q8IZU2 1322 aa24.94■■□□□ 1.58
PDLIM3-202ENST00000284770 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
PDLIM3-202ENST00000284770 RGPD2P0DJD1 1756 aa24.93■■□□□ 1.58
PDLIM3-202ENST00000284770 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
PDLIM3-202ENST00000284770 EVA1CP58658 441 aa24.92■■□□□ 1.58
PDLIM3-202ENST00000284770 FAM208AQ9UK61 1670 aaKnown RBP24.92■■□□□ 1.58
PDLIM3-202ENST00000284770 RRP7AQ9Y3A4 280 aaKnown RBP24.91■■□□□ 1.58
PDLIM3-202ENST00000284770 NEUROD2Q15784 382 aa24.9■■□□□ 1.58
PDLIM3-202ENST00000284770 STRN4Q9NRL3 753 aa24.9■■□□□ 1.58
PDLIM3-202ENST00000284770 NFE2L2Q16236 605 aa24.88■■□□□ 1.57
PDLIM3-202ENST00000284770 CCDC27Q2M243 656 aa24.88■■□□□ 1.57
PDLIM3-202ENST00000284770 TOM1L2Q6ZVM7 507 aa24.88■■□□□ 1.57
PDLIM3-202ENST00000284770 RIPK4P57078 832 aa24.87■■□□□ 1.57
PDLIM3-202ENST00000284770 LARP1Q6PKG0 1096 aaKnown RBP24.87■■□□□ 1.57
PDLIM3-202ENST00000284770 PHF23Q9BUL5 403 aaPredicted RBP24.87■■□□□ 1.57
PDLIM3-202ENST00000284770 ZNF521Q96K83 1311 aa24.86■■□□□ 1.57
PDLIM3-202ENST00000284770 CARD10Q9BWT7 1032 aa24.86■■□□□ 1.57
PDLIM3-202ENST00000284770 LRP6O75581 1613 aa24.86■■□□□ 1.57
PDLIM3-202ENST00000284770 WWC1Q8IX03 1113 aa24.85■■□□□ 1.57
PDLIM3-202ENST00000284770 PLCH1Q4KWH8 1693 aa24.85■■□□□ 1.57
PDLIM3-202ENST00000284770 CRB1P82279 1406 aa24.84■■□□□ 1.57
PDLIM3-202ENST00000284770 SLIT2O94813 1529 aa24.84■■□□□ 1.57
PDLIM3-202ENST00000284770 PDE3BQ13370 1112 aa24.83■■□□□ 1.57
PDLIM3-202ENST00000284770 MTHFSDQ2M296 383 aaKnown RBP24.83■■□□□ 1.57
PDLIM3-202ENST00000284770 FBXO41Q8TF61 875 aa24.83■■□□□ 1.57
PDLIM3-202ENST00000284770 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
PDLIM3-202ENST00000284770 RAPGEF4Q8WZA2 1011 aa24.82■■□□□ 1.56
PDLIM3-202ENST00000284770 C8orf37Q96NL8 207 aa24.82■■□□□ 1.56
PDLIM3-202ENST00000284770 TRIM35Q9UPQ4 493 aa24.82■■□□□ 1.56
PDLIM3-202ENST00000284770 NGLY1Q96IV0 654 aa24.82■■□□□ 1.56
PDLIM3-202ENST00000284770 NWD2Q9ULI1 1742 aa24.8■■□□□ 1.56
PDLIM3-202ENST00000284770 AMOTQ4VCS5 1084 aa24.8■■□□□ 1.56
PDLIM3-202ENST00000284770 PLEKHG2Q9H7P9 1386 aa24.8■■□□□ 1.56
PDLIM3-202ENST00000284770 PLEKHO1Q53GL0 409 aaPredicted RBP24.8■■□□□ 1.56
PDLIM3-202ENST00000284770 FNBP4Q8N3X1 1017 aaPredicted RBP24.8■■□□□ 1.56
PDLIM3-202ENST00000284770 TATP17735 454 aaPredicted RBP24.79■■□□□ 1.56
PDLIM3-202ENST00000284770 GOLGA2Q08379 1002 aa24.79■■□□□ 1.56
PDLIM3-202ENST00000284770 NRAPQ86VF7 1730 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms