RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 DONSONQ9NYP3 566 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 CHMP7Q8WUX9 453 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 RRP7BPQ9NSQ0 103 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 MAGEC2Q9UBF1 373 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 MRC2Q9UBG0 1479 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 HSP90AB1P08238 724 aaKnown RBP10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 PDE6BP35913 854 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 E2F5Q15329 346 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 FAM184AQ8NB25 1140 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 DCAF11Q8TEB1 546 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 GBP4Q96PP9 640 aa10.66□□□□□ -0.7
CTDSPL-201ENST00000273179 GOLGA6L19H0YKK7 550 aa10.65□□□□□ -0.7
CTDSPL-201ENST00000273179 DBN1Q16643 649 aa10.65□□□□□ -0.7
CTDSPL-201ENST00000273179 WDR97A6NE52 1622 aa10.65□□□□□ -0.7
CTDSPL-201ENST00000273179 IPO5O00410 1097 aaKnown RBP10.65□□□□□ -0.7
CTDSPL-201ENST00000273179 NPHP1O15259 732 aa10.65□□□□□ -0.7
CTDSPL-201ENST00000273179 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.7
CTDSPL-201ENST00000273179 LCA5Q86VQ0 697 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 KLHL42Q9P2K6 505 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 CUL7Q14999 1698 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 PSMD2Q13200 908 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 CCDC47Q96A33 483 aaKnown RBP10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 CASKIN1Q8WXD9 1431 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 RABL2BQ9UNT1 228 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 PPFIA3O75145 1194 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 ANKRD23Q86SG2 305 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 TTC30BQ8N4P2 665 aa10.64□□□□□ -0.71
CTDSPL-201ENST00000273179 CCT2P78371 535 aaKnown RBP10.63□□□□□ -0.71
CTDSPL-201ENST00000273179 SPATA32Q96LK8 384 aa10.63□□□□□ -0.71
CTDSPL-201ENST00000273179 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
CTDSPL-201ENST00000273179 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL-201ENST00000273179 MRE11P49959 708 aa10.63□□□□□ -0.71
CTDSPL-201ENST00000273179 CTTNBP2Q8WZ74 1663 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 TESPA1A2RU30 521 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 RBM5P52756 815 aaKnown RBP eCLIP10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 EVI5LQ96CN4 794 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 SESN3P58005 492 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 PUS10Q3MIT2 529 aaKnown RBP10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 RNF214Q8ND24 703 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 NEBLO76041 1014 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 CCDC70Q6NSX1 233 aa10.62□□□□□ -0.71
CTDSPL-201ENST00000273179 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 ABL2P42684 1182 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 NME8Q8N427 588 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 PRPF38AQ8NAV1 312 aaKnown RBP10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 IQCGQ9H095 443 aaKnown RBP10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 G3BP2Q9UN86 482 aaKnown RBP10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 SLMAPQ14BN4 828 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 PDCL2Q8N4E4 241 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 TRIM11Q96F44 468 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 EIF4G2P78344 907 aaKnown RBP eCLIP10.61□□□□□ -0.718e-7■■■■■ 29.1
CTDSPL-201ENST00000273179 TEX35Q5T0J7 233 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 FYCO1Q9BQS8 1478 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 CXorf56Q9H5V9 222 aa10.61□□□□□ -0.71
CTDSPL-201ENST00000273179 PTPRKQ15262 1439 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 WWC2Q6AWC2 1192 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 OGFOD1Q8N543 542 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 MPP4Q96JB8 637 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 ATICP31939 592 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 USP8P40818 1118 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 DNAJC21Q5F1R6 531 aaKnown RBP10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 TRAIPQ9BWF2 469 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 CDK13Q14004 1512 aaKnown RBP10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 CDR1P51861 262 aa10.6□□□□□ -0.71
CTDSPL-201ENST00000273179 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 FRAT2O75474 233 aaPredicted RBP10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 ENOX2Q16206 610 aaKnown RBP10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 SEPT14Q6ZU15 432 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 FMNL3Q8IVF7 1028 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 SDR16C5Q8N3Y7 309 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 SUGT1Q9Y2Z0 365 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 XBP1P17861 261 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 USP5P45974 858 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 ZNHIT6Q9NWK9 470 aaKnown RBP10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
CTDSPL-201ENST00000273179 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 SKAP1Q86WV1 359 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 C22orf23Q9BZE7 217 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 LRRC27Q9C0I9 530 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 IRF5Q13568 498 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 NFXL1Q6ZNB6 911 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 MRFAP1L1Q96HT8 127 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 RGL2O15211 777 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 ZNF662Q6ZS27 426 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 KLHL23Q8NBE8 558 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 ZHX3Q9H4I2 956 aa10.58□□□□□ -0.72
CTDSPL-201ENST00000273179 TPM1P09493 284 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 PSMC1P62191 440 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms