RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 TRPC5Q9UL62 973 aaPredicted RBP22.39■■□□□ 1.18
SNRPF-201ENST00000266735 ANKRD26Q9UPS8 1709 aa22.39■■□□□ 1.18
SNRPF-201ENST00000266735 CNGB1Q14028 1251 aaPredicted RBP22.38■■□□□ 1.17
SNRPF-201ENST00000266735 AXIN2Q9Y2T1 843 aa22.38■■□□□ 1.17
SNRPF-201ENST00000266735 LMO7Q8WWI1 1683 aa22.38■■□□□ 1.17
SNRPF-201ENST00000266735 CAMTA1Q9Y6Y1 1673 aa22.38■■□□□ 1.17
SNRPF-201ENST00000266735 BLMP54132 1417 aaPredicted RBP22.38■■□□□ 1.17
SNRPF-201ENST00000266735 HOXC9P31274 260 aa22.38■■□□□ 1.17
SNRPF-201ENST00000266735 EVA1CP58658 441 aa22.38■■□□□ 1.17
SNRPF-201ENST00000266735 POLKQ9UBT6 870 aa22.38■■□□□ 1.17
SNRPF-201ENST00000266735 PLCH1Q4KWH8 1693 aa22.37■■□□□ 1.17
SNRPF-201ENST00000266735 STRN4Q9NRL3 753 aa22.37■■□□□ 1.17
SNRPF-201ENST00000266735 EMILIN1Q9Y6C2 1016 aa22.37■■□□□ 1.17
SNRPF-201ENST00000266735 FLT4P35916 1363 aa22.36■■□□□ 1.17
SNRPF-201ENST00000266735 COL5A2P05997 1499 aaPredicted RBP22.36■■□□□ 1.17
SNRPF-201ENST00000266735 NWD2Q9ULI1 1742 aa22.36■■□□□ 1.17
SNRPF-201ENST00000266735 VPS72Q15906 364 aa22.36■■□□□ 1.17
SNRPF-201ENST00000266735 QTRT2Q9H974 415 aaKnown RBP22.36■■□□□ 1.17
SNRPF-201ENST00000266735 ATRNO75882 1429 aa22.35■■□□□ 1.17
SNRPF-201ENST00000266735 PPM1GO15355 546 aaPredicted RBP22.35■■□□□ 1.17
SNRPF-201ENST00000266735 SMG6Q86US8 1419 aaKnown RBP22.33■■□□□ 1.17
SNRPF-201ENST00000266735 COL18A1P39060 1754 aa22.33■■□□□ 1.16
SNRPF-201ENST00000266735 ERBB3P21860 1342 aa22.32■■□□□ 1.16
SNRPF-201ENST00000266735 CSB-PGBD3P0DP91 1061 aa22.32■■□□□ 1.16
SNRPF-201ENST00000266735 POTEAQ6S8J7 498 aa22.32■■□□□ 1.16
SNRPF-201ENST00000266735 WDR17Q8IZU2 1322 aa22.32■■□□□ 1.16
SNRPF-201ENST00000266735 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.32■■□□□ 1.16
SNRPF-201ENST00000266735 INSRP06213 1382 aa22.31■■□□□ 1.16
SNRPF-201ENST00000266735 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
SNRPF-201ENST00000266735 RALBP1Q15311 655 aa22.31■■□□□ 1.16
SNRPF-201ENST00000266735 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
SNRPF-201ENST00000266735 LARP1Q6PKG0 1096 aaKnown RBP22.31■■□□□ 1.16
SNRPF-201ENST00000266735 ANKRD24Q8TF21 1146 aa22.31■■□□□ 1.16
SNRPF-201ENST00000266735 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
SNRPF-201ENST00000266735 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
SNRPF-201ENST00000266735 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
SNRPF-201ENST00000266735 LTN1O94822 1766 aa22.3■■□□□ 1.16
SNRPF-201ENST00000266735 CRB1P82279 1406 aa22.29■■□□□ 1.16
SNRPF-201ENST00000266735 RBM6P78332 1123 aaKnown RBP22.29■■□□□ 1.16
SNRPF-201ENST00000266735 TOM1L2Q6ZVM7 507 aa22.29■■□□□ 1.16
SNRPF-201ENST00000266735 SPATA31A5Q5VU36 1347 aa22.29■■□□□ 1.16
SNRPF-201ENST00000266735 SPATA31A7Q8IWB4 1347 aa22.29■■□□□ 1.16
SNRPF-201ENST00000266735 RXRBP28702 533 aa22.28■■□□□ 1.16
SNRPF-201ENST00000266735 MTHFSP49914 203 aa22.28■■□□□ 1.16
SNRPF-201ENST00000266735 CDK12Q9NYV4 1490 aaPredicted RBP22.27■■□□□ 1.16
SNRPF-201ENST00000266735 PPP2R1AP30153 589 aa22.27■■□□□ 1.16
SNRPF-201ENST00000266735 LTV1Q96GA3 475 aaPredicted RBP22.27■■□□□ 1.16
SNRPF-201ENST00000266735 SPATA31A1Q5TZJ5 1347 aa22.27■■□□□ 1.16
SNRPF-201ENST00000266735 PEAK1Q9H792 1746 aa22.27■■□□□ 1.16
SNRPF-201ENST00000266735 TCP11L2Q8N4U5 519 aa22.25■■□□□ 1.15
SNRPF-201ENST00000266735 CARD10Q9BWT7 1032 aa22.25■■□□□ 1.15
SNRPF-201ENST00000266735 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
SNRPF-201ENST00000266735 USP35Q9P2H5 1018 aa22.25■■□□□ 1.15
SNRPF-201ENST00000266735 THRAP3Q9Y2W1 955 aaKnown RBP22.25■■□□□ 1.15
SNRPF-201ENST00000266735 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
SNRPF-201ENST00000266735 EIF4A2Q14240 407 aaKnown RBP22.22■■□□□ 1.15
SNRPF-201ENST00000266735 BARGINQ6ZT62 677 aa22.22■■□□□ 1.15
SNRPF-201ENST00000266735 GLI3P10071 1580 aa22.21■■□□□ 1.15
SNRPF-201ENST00000266735 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
SNRPF-201ENST00000266735 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
SNRPF-201ENST00000266735 ONECUT3O60422 494 aaPredicted RBP22.2■■□□□ 1.14
SNRPF-201ENST00000266735 ANP32CO43423 234 aa22.19■■□□□ 1.14
SNRPF-201ENST00000266735 FAM98CQ17RN3 349 aaKnown RBP22.19■■□□□ 1.14
SNRPF-201ENST00000266735 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
SNRPF-201ENST00000266735 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
SNRPF-201ENST00000266735 MAP2P11137 1827 aaKnown RBP22.19■■□□□ 1.14
SNRPF-201ENST00000266735 DIAPH1O60610 1272 aaKnown RBP22.17■■□□□ 1.14
SNRPF-201ENST00000266735 IL13P35225 146 aa22.17■■□□□ 1.14
SNRPF-201ENST00000266735 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
SNRPF-201ENST00000266735 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
SNRPF-201ENST00000266735 FAM208AQ9UK61 1670 aaKnown RBP22.16■■□□□ 1.14
SNRPF-201ENST00000266735 EYA1Q99502 592 aa22.15■■□□□ 1.14
SNRPF-201ENST00000266735 RGS12O14924 1447 aa22.14■■□□□ 1.14
SNRPF-201ENST00000266735 A0A0G2JS52 829 aa22.14■■□□□ 1.14
SNRPF-201ENST00000266735 MYT1Q01538 1121 aa22.14■■□□□ 1.14
SNRPF-201ENST00000266735 SEPT12Q8IYM1 358 aa22.14■■□□□ 1.14
SNRPF-201ENST00000266735 COL3A1P02461 1466 aaPredicted RBP22.14■■□□□ 1.13
SNRPF-201ENST00000266735 IGSF1Q8N6C5 1336 aa22.14■■□□□ 1.13
SNRPF-201ENST00000266735 IL2RBP14784 551 aa22.13■■□□□ 1.13
SNRPF-201ENST00000266735 USHBP1Q8N6Y0 703 aa22.12■■□□□ 1.13
SNRPF-201ENST00000266735 DISP2A7MBM2 1401 aa22.12■■□□□ 1.13
SNRPF-201ENST00000266735 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
SNRPF-201ENST00000266735 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
SNRPF-201ENST00000266735 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
SNRPF-201ENST00000266735 THSD7AQ9UPZ6 1657 aa22.09■■□□□ 1.13
SNRPF-201ENST00000266735 DDB1Q16531 1140 aa22.08■■□□□ 1.12
SNRPF-201ENST00000266735 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
SNRPF-201ENST00000266735 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
SNRPF-201ENST00000266735 KDRP35968 1356 aa22.06■■□□□ 1.12
SNRPF-201ENST00000266735 EXOC5O00471 708 aa22.06■■□□□ 1.12
SNRPF-201ENST00000266735 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
SNRPF-201ENST00000266735 MEGF6O75095 1541 aa22.06■■□□□ 1.12
SNRPF-201ENST00000266735 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
SNRPF-201ENST00000266735 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
SNRPF-201ENST00000266735 ILDR2Q71H61 639 aa22.05■■□□□ 1.12
SNRPF-201ENST00000266735 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
SNRPF-201ENST00000266735 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
SNRPF-201ENST00000266735 OVOS2A0A0G2JMS6 1433 aa22.04■■□□□ 1.12
SNRPF-201ENST00000266735 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
SNRPF-201ENST00000266735 TNS2Q63HR2 1409 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms