RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 PANK3Q9H999 370 aa11.66□□□□□ -0.54
ERCC8-201ENST00000265038 NRAPQ86VF7 1730 aa11.65□□□□□ -0.54
ERCC8-201ENST00000265038 LMO7Q8WWI1 1683 aa11.65□□□□□ -0.55
ERCC8-201ENST00000265038 USP35Q9P2H5 1018 aa11.64□□□□□ -0.55
ERCC8-201ENST00000265038 COL5A2P05997 1499 aaPredicted RBP11.64□□□□□ -0.55
ERCC8-201ENST00000265038 MYOM1P52179 1685 aa11.64□□□□□ -0.55
ERCC8-201ENST00000265038 UPF1Q92900 1129 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERCC8-201ENST00000265038 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
ERCC8-201ENST00000265038 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
ERCC8-201ENST00000265038 MAP3K19Q56UN5 1328 aa11.63□□□□□ -0.55
ERCC8-201ENST00000265038 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 A0A0G2JS52 829 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 MYT1Q01538 1121 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
ERCC8-201ENST00000265038 TOM1L2Q6ZVM7 507 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 IP6K1Q92551 441 aa11.62□□□□□ -0.55
ERCC8-201ENST00000265038 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
ERCC8-201ENST00000265038 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
ERCC8-201ENST00000265038 COL18A1P39060 1754 aa11.61□□□□□ -0.55
ERCC8-201ENST00000265038 CRB1P82279 1406 aa11.61□□□□□ -0.55
ERCC8-201ENST00000265038 CCDC7Q96M83 1385 aa11.61□□□□□ -0.55
ERCC8-201ENST00000265038 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 ADRA2BP18089 450 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 HOXC9P31274 260 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 ANKRD24Q8TF21 1146 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 CARD10Q9BWT7 1032 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 ERBB3P21860 1342 aa11.6□□□□□ -0.55
ERCC8-201ENST00000265038 AMPHP49418 695 aa11.59□□□□□ -0.55
ERCC8-201ENST00000265038 ABCC6O95255 1503 aa11.58□□□□□ -0.56
ERCC8-201ENST00000265038 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-201ENST00000265038 KNSTRNQ9Y448 316 aa11.58□□□□□ -0.56
ERCC8-201ENST00000265038 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
ERCC8-201ENST00000265038 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
ERCC8-201ENST00000265038 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
ERCC8-201ENST00000265038 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
ERCC8-201ENST00000265038 BLMP54132 1417 aaPredicted RBP11.57□□□□□ -0.56
ERCC8-201ENST00000265038 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
ERCC8-201ENST00000265038 HSP90AB2PQ58FF8 381 aa11.56□□□□□ -0.56
ERCC8-201ENST00000265038 POLKQ9UBT6 870 aa11.56□□□□□ -0.56
ERCC8-201ENST00000265038 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
ERCC8-201ENST00000265038 RTL1A6NKG5 1358 aa11.55□□□□□ -0.56
ERCC8-201ENST00000265038 TNNT2P45379 298 aaPredicted RBP11.55□□□□□ -0.56
ERCC8-201ENST00000265038 NSD2O96028 1365 aa11.55□□□□□ -0.56
ERCC8-201ENST00000265038 DISP2A7MBM2 1401 aa11.54□□□□□ -0.56
ERCC8-201ENST00000265038 PDE3BQ13370 1112 aa11.54□□□□□ -0.56
ERCC8-201ENST00000265038 CDCA7Q9BWT1 371 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-201ENST00000265038 INSRP06213 1382 aa11.54□□□□□ -0.56
ERCC8-201ENST00000265038 FLT4P35916 1363 aa11.54□□□□□ -0.56
ERCC8-201ENST00000265038 KIF24Q5T7B8 1368 aa11.54□□□□□ -0.56
ERCC8-201ENST00000265038 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
ERCC8-201ENST00000265038 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
ERCC8-201ENST00000265038 DDB1Q16531 1140 aa11.53□□□□□ -0.56
ERCC8-201ENST00000265038 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
ERCC8-201ENST00000265038 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
ERCC8-201ENST00000265038 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
ERCC8-201ENST00000265038 KIF20BQ96Q89 1820 aa11.52□□□□□ -0.57
ERCC8-201ENST00000265038 EXOC5O00471 708 aa11.52□□□□□ -0.57
ERCC8-201ENST00000265038 IL2RBP14784 551 aa11.52□□□□□ -0.57
ERCC8-201ENST00000265038 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
ERCC8-201ENST00000265038 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
ERCC8-201ENST00000265038 FAM196AQ6ZSG2 479 aa11.52□□□□□ -0.57
ERCC8-201ENST00000265038 MARCH10Q8NA82 808 aaPredicted RBP11.51□□□□□ -0.57
ERCC8-201ENST00000265038 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
ERCC8-201ENST00000265038 LTN1O94822 1766 aa11.51□□□□□ -0.57
ERCC8-201ENST00000265038 USHBP1Q8N6Y0 703 aa11.5□□□□□ -0.57
ERCC8-201ENST00000265038 RGPD5Q99666 1765 aa11.5□□□□□ -0.57
ERCC8-201ENST00000265038 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
ERCC8-201ENST00000265038 DEFB132Q7Z7B7 95 aa11.49□□□□□ -0.57
ERCC8-201ENST00000265038 NPC1L1Q9UHC9 1359 aa11.49□□□□□ -0.57
ERCC8-201ENST00000265038 SMG6Q86US8 1419 aaKnown RBP11.49□□□□□ -0.57
ERCC8-201ENST00000265038 TRIM37O94972 964 aa11.48□□□□□ -0.57
ERCC8-201ENST00000265038 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
ERCC8-201ENST00000265038 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
ERCC8-201ENST00000265038 EIF4A2Q14240 407 aaKnown RBP11.48□□□□□ -0.57
ERCC8-201ENST00000265038 EYA1Q99502 592 aa11.48□□□□□ -0.57
ERCC8-201ENST00000265038 PARP4Q9UKK3 1724 aaKnown RBP11.47□□□□□ -0.57
ERCC8-201ENST00000265038 TNS2Q63HR2 1409 aa11.46□□□□□ -0.57
ERCC8-201ENST00000265038 LRRC37A3O60309 1634 aa11.46□□□□□ -0.57
ERCC8-201ENST00000265038 MTHFSP49914 203 aa11.46□□□□□ -0.57
ERCC8-201ENST00000265038 OVOS2A0A0G2JMS6 1433 aa11.46□□□□□ -0.58
ERCC8-201ENST00000265038 MEGF6O75095 1541 aa11.45□□□□□ -0.58
ERCC8-201ENST00000265038 BCL9O00512 1426 aa11.45□□□□□ -0.58
ERCC8-201ENST00000265038 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
ERCC8-201ENST00000265038 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
ERCC8-201ENST00000265038 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
ERCC8-201ENST00000265038 BAG6P46379 1132 aa11.45□□□□□ -0.58
ERCC8-201ENST00000265038 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
ERCC8-201ENST00000265038 DDX54Q8TDD1 881 aaKnown RBP11.45□□□□□ -0.58
ERCC8-201ENST00000265038 NCAPD2Q15021 1401 aa11.44□□□□□ -0.58
ERCC8-201ENST00000265038 APBA3O96018 575 aa11.44□□□□□ -0.58
ERCC8-201ENST00000265038 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
ERCC8-201ENST00000265038 FAM208AQ9UK61 1670 aaKnown RBP11.44□□□□□ -0.58
ERCC8-201ENST00000265038 ANKRD26Q9UPS8 1709 aa11.44□□□□□ -0.58
ERCC8-201ENST00000265038 IL13P35225 146 aa11.43□□□□□ -0.58
ERCC8-201ENST00000265038 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
ERCC8-201ENST00000265038 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
ERCC8-201ENST00000265038 IGSF1Q8N6C5 1336 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms