RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 KIF7Q2M1P5 1343 aa19.74■□□□□ 0.75
CNN1-201ENST00000252456 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
CNN1-201ENST00000252456 ONECUT3O60422 494 aaPredicted RBP19.74■□□□□ 0.75
CNN1-201ENST00000252456 STRN4Q9NRL3 753 aa19.74■□□□□ 0.75
CNN1-201ENST00000252456 SPATA31A1Q5TZJ5 1347 aa19.74■□□□□ 0.75
CNN1-201ENST00000252456 LARP1Q6PKG0 1096 aaKnown RBP19.73■□□□□ 0.75
CNN1-201ENST00000252456 GGNBP2Q9H3C7 697 aa19.73■□□□□ 0.75
CNN1-201ENST00000252456 COG3Q96JB2 828 aa19.72■□□□□ 0.75
CNN1-201ENST00000252456 ANKRD26Q9UPS8 1709 aa19.71■□□□□ 0.75
CNN1-201ENST00000252456 FAM98CQ17RN3 349 aaKnown RBP19.7■□□□□ 0.74
CNN1-201ENST00000252456 FBLN1P23142 703 aa19.69■□□□□ 0.74
CNN1-201ENST00000252456 EVA1CP58658 441 aa19.69■□□□□ 0.74
CNN1-201ENST00000252456 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
CNN1-201ENST00000252456 CRB1P82279 1406 aa19.69■□□□□ 0.74
CNN1-201ENST00000252456 PANK3Q9H999 370 aa19.69■□□□□ 0.74
CNN1-201ENST00000252456 WNK3Q9BYP7 1800 aa19.68■□□□□ 0.74
CNN1-201ENST00000252456 WDR17Q8IZU2 1322 aa19.68■□□□□ 0.74
CNN1-201ENST00000252456 CCDC7Q96M83 1385 aa19.67■□□□□ 0.74
CNN1-201ENST00000252456 WASHC2AQ641Q2 1341 aa19.67■□□□□ 0.74
CNN1-201ENST00000252456 USP35Q9P2H5 1018 aa19.66■□□□□ 0.74
CNN1-201ENST00000252456 CGNL1Q0VF96 1302 aa19.66■□□□□ 0.74
CNN1-201ENST00000252456 MAP3K19Q56UN5 1328 aa19.66■□□□□ 0.74
CNN1-201ENST00000252456 PEAK1Q9H792 1746 aa19.66■□□□□ 0.74
CNN1-201ENST00000252456 PARP4Q9UKK3 1724 aaKnown RBP19.65■□□□□ 0.74
CNN1-201ENST00000252456 BARGINQ6ZT62 677 aa19.65■□□□□ 0.74
CNN1-201ENST00000252456 ERBB3P21860 1342 aa19.65■□□□□ 0.74
CNN1-201ENST00000252456 BLMP54132 1417 aaPredicted RBP19.64■□□□□ 0.74
CNN1-201ENST00000252456 TCP11L2Q8N4U5 519 aa19.64■□□□□ 0.73
CNN1-201ENST00000252456 UPF1Q92900 1129 aaKnown RBP eCLIP19.64■□□□□ 0.73
CNN1-201ENST00000252456 RRS1Q15050 365 aaKnown RBP19.62■□□□□ 0.73
CNN1-201ENST00000252456 IP6K1Q92551 441 aa19.62■□□□□ 0.73
CNN1-201ENST00000252456 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
CNN1-201ENST00000252456 TOM1L2Q6ZVM7 507 aa19.62■□□□□ 0.73
CNN1-201ENST00000252456 THRAP3Q9Y2W1 955 aaKnown RBP19.62■□□□□ 0.73
CNN1-201ENST00000252456 LRRC37A3O60309 1634 aa19.61■□□□□ 0.73
CNN1-201ENST00000252456 MAP2P11137 1827 aaKnown RBP19.61■□□□□ 0.73
CNN1-201ENST00000252456 A0A0G2JS52 829 aa19.61■□□□□ 0.73
CNN1-201ENST00000252456 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
CNN1-201ENST00000252456 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
CNN1-201ENST00000252456 MYT1Q01538 1121 aa19.61■□□□□ 0.73
CNN1-201ENST00000252456 HOXC9P31274 260 aa19.6■□□□□ 0.73
CNN1-201ENST00000252456 KRT27Q7Z3Y8 459 aa19.6■□□□□ 0.73
CNN1-201ENST00000252456 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
CNN1-201ENST00000252456 CARD10Q9BWT7 1032 aa19.59■□□□□ 0.73
CNN1-201ENST00000252456 NSD2O96028 1365 aa19.59■□□□□ 0.73
CNN1-201ENST00000252456 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.73
CNN1-201ENST00000252456 ANKRD24Q8TF21 1146 aa19.58■□□□□ 0.73
CNN1-201ENST00000252456 PER1O15534 1290 aaPredicted RBP19.58■□□□□ 0.72
CNN1-201ENST00000252456 KIF24Q5T7B8 1368 aa19.57■□□□□ 0.72
CNN1-201ENST00000252456 AMPHP49418 695 aa19.57■□□□□ 0.72
CNN1-201ENST00000252456 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
CNN1-201ENST00000252456 EMILIN1Q9Y6C2 1016 aa19.56■□□□□ 0.72
CNN1-201ENST00000252456 KNSTRNQ9Y448 316 aa19.55■□□□□ 0.72
CNN1-201ENST00000252456 FLT4P35916 1363 aa19.55■□□□□ 0.72
CNN1-201ENST00000252456 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
CNN1-201ENST00000252456 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
CNN1-201ENST00000252456 NLRP2Q9NX02 1062 aa19.54■□□□□ 0.72
CNN1-201ENST00000252456 INSRP06213 1382 aa19.53■□□□□ 0.72
CNN1-201ENST00000252456 LTV1Q96GA3 475 aaPredicted RBP19.53■□□□□ 0.72
CNN1-201ENST00000252456 POLKQ9UBT6 870 aa19.52■□□□□ 0.72
CNN1-201ENST00000252456 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.71
CNN1-201ENST00000252456 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
CNN1-201ENST00000252456 TNS1Q9HBL0 1735 aaKnown RBP19.5■□□□□ 0.71
CNN1-201ENST00000252456 CDCA7Q9BWT1 371 aaPredicted RBP19.5■□□□□ 0.71
CNN1-201ENST00000252456 RGPD1P0DJD0 1748 aa19.49■□□□□ 0.71
CNN1-201ENST00000252456 TNS2Q63HR2 1409 aa19.49■□□□□ 0.71
CNN1-201ENST00000252456 PDE3BQ13370 1112 aa19.48■□□□□ 0.71
CNN1-201ENST00000252456 DDB1Q16531 1140 aa19.48■□□□□ 0.71
CNN1-201ENST00000252456 SBF2Q86WG5 1849 aa19.48■□□□□ 0.71
CNN1-201ENST00000252456 NPC1L1Q9UHC9 1359 aa19.48■□□□□ 0.71
CNN1-201ENST00000252456 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
CNN1-201ENST00000252456 MORC1Q86VD1 984 aa19.47■□□□□ 0.71
CNN1-201ENST00000252456 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
CNN1-201ENST00000252456 SHANK3Q9BYB0 1731 aa19.47■□□□□ 0.71
CNN1-201ENST00000252456 PPM1GO15355 546 aaPredicted RBP19.47■□□□□ 0.71
CNN1-201ENST00000252456 MEGF6O75095 1541 aa19.46■□□□□ 0.71
CNN1-201ENST00000252456 NCAPD2Q15021 1401 aa19.46■□□□□ 0.71
CNN1-201ENST00000252456 IL2RBP14784 551 aa19.46■□□□□ 0.71
CNN1-201ENST00000252456 CCDC125Q86Z20 511 aa19.46■□□□□ 0.71
CNN1-201ENST00000252456 OVOS2A0A0G2JMS6 1433 aa19.45■□□□□ 0.7
CNN1-201ENST00000252456 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
CNN1-201ENST00000252456 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
CNN1-201ENST00000252456 MARCH10Q8NA82 808 aaPredicted RBP19.44■□□□□ 0.7
CNN1-201ENST00000252456 CC2D1BQ5T0F9 858 aaKnown RBP19.43■□□□□ 0.7
CNN1-201ENST00000252456 USHBP1Q8N6Y0 703 aa19.43■□□□□ 0.7
CNN1-201ENST00000252456 BCL9O00512 1426 aa19.43■□□□□ 0.7
CNN1-201ENST00000252456 EXOC5O00471 708 aa19.41■□□□□ 0.7
CNN1-201ENST00000252456 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
CNN1-201ENST00000252456 TRIM37O94972 964 aa19.4■□□□□ 0.7
CNN1-201ENST00000252456 DEFB132Q7Z7B7 95 aa19.4■□□□□ 0.7
CNN1-201ENST00000252456 EYA1Q99502 592 aa19.39■□□□□ 0.69
CNN1-201ENST00000252456 PKD1L3Q7Z443 1732 aa19.39■□□□□ 0.69
CNN1-201ENST00000252456 NHSQ6T4R5 1651 aa19.37■□□□□ 0.69
CNN1-201ENST00000252456 MTHFSP49914 203 aa19.36■□□□□ 0.69
CNN1-201ENST00000252456 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
CNN1-201ENST00000252456 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
CNN1-201ENST00000252456 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
CNN1-201ENST00000252456 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
CNN1-201ENST00000252456 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
CNN1-201ENST00000252456 RAPGEF4Q8WZA2 1011 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms