RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 ABCC5O15440 1437 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 RPGRIP1LQ68CZ1 1315 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
STAG1-201ENST00000236698 TPM2P07951 284 aa8.29□□□□□ -1.08
STAG1-201ENST00000236698 RDXP35241 583 aaKnown RBP8.29□□□□□ -1.08
STAG1-201ENST00000236698 INCENPQ9NQS7 918 aa8.29□□□□□ -1.08
STAG1-201ENST00000236698 IPO8O15397 1037 aaKnown RBP8.29□□□□□ -1.08
STAG1-201ENST00000236698 CASQ1P31415 396 aa8.29□□□□□ -1.08
STAG1-201ENST00000236698 ATL2Q8NHH9 583 aa8.29□□□□□ -1.08
STAG1-201ENST00000236698 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
STAG1-201ENST00000236698 CAGE1Q8TC20 777 aa8.29□□□□□ -1.08
STAG1-201ENST00000236698 STK25O00506 426 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 HSP90AB1P08238 724 aaKnown RBP8.28□□□□□ -1.08
STAG1-201ENST00000236698 ANAPC4Q9UJX5 808 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 PMFBP1Q8TBY8 1022 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
STAG1-201ENST00000236698 DNAI2Q9GZS0 605 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 KIF21AQ7Z4S6 1674 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 TNNT1P13805 278 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 SSFA2P28290 1259 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 CWC15Q9P013 229 aaKnown RBP8.28□□□□□ -1.08
STAG1-201ENST00000236698 GNL2Q13823 731 aaKnown RBP8.28□□□□□ -1.08
STAG1-201ENST00000236698 CHMP4CQ96CF2 233 aa8.28□□□□□ -1.08
STAG1-201ENST00000236698 GGT6Q6P531 493 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 FAM43AQ8N2R8 423 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
STAG1-201ENST00000236698 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
STAG1-201ENST00000236698 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 SHANK2Q9UPX8 1470 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 ATICP31939 592 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 BTN2A1Q7KYR7 527 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 ERBB3P21860 1342 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 CGNL1Q0VF96 1302 aa8.27□□□□□ -1.09
STAG1-201ENST00000236698 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.099e-7■■■■□ 24.5
STAG1-201ENST00000236698 TCF3P15923 654 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 SH3BP1Q9Y3L3 701 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 SLMAPQ14BN4 828 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 MTERF4Q7Z6M4 381 aaKnown RBP8.26□□□□□ -1.09
STAG1-201ENST00000236698 TANGO6Q9C0B7 1094 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 NUP160Q12769 1436 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 EVC2Q86UK5 1308 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 ARHGAP5Q13017 1502 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 BIN2Q9UBW5 565 aaPredicted RBP8.26□□□□□ -1.09
STAG1-201ENST00000236698 MYO6Q9UM54 1294 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 SLC4A8Q2Y0W8 1093 aa8.26□□□□□ -1.09
STAG1-201ENST00000236698 H0YHG0 523 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 SARNPP82979 210 aaKnown RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 SETDB1Q15047 1291 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 ZNF662Q6ZS27 426 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 ADAMTS12P58397 1594 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 CCDC189A1A4V9 331 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 GPATCH8Q9UKJ3 1502 aaKnown RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 S100BP04271 92 aaPredicted RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 FBXO9Q9UK97 447 aaPredicted RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 CAMSAP2Q08AD1 1489 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 KIF14Q15058 1648 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 PPFIA3O75145 1194 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 PDE6BP35913 854 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 SF3A1Q15459 793 aaKnown RBP8.25□□□□□ -1.09
STAG1-201ENST00000236698 ANKRD18AQ8IVF6 992 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 BCL2L13Q9BXK5 485 aa8.25□□□□□ -1.09
STAG1-201ENST00000236698 CTTNBP2Q8WZ74 1663 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 UBXN4Q92575 508 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 CENPJQ9HC77 1338 aaPredicted RBP8.24□□□□□ -1.09
STAG1-201ENST00000236698 CCDC66A2RUB6 948 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 CCDC92Q53HC0 331 aaPredicted RBP8.24□□□□□ -1.09
STAG1-201ENST00000236698 HDGFL1Q5TGJ6 251 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 FEZ2Q9UHY8 353 aaPredicted RBP8.24□□□□□ -1.09
STAG1-201ENST00000236698 NUB1Q9Y5A7 615 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 COPB2P35606 906 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 GIPC2Q8TF65 315 aa8.24□□□□□ -1.09
STAG1-201ENST00000236698 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
STAG1-201ENST00000236698 ARGLU1Q9NWB6 273 aaPredicted RBP8.24□□□□□ -1.09
STAG1-201ENST00000236698 KCNV2Q8TDN2 545 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 SATB1Q01826 763 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 CCDC47Q96A33 483 aaKnown RBP8.23□□□□□ -1.09
STAG1-201ENST00000236698 FANCIQ9NVI1 1328 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 SAMD9Q5K651 1589 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 TPM1P09493 284 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
STAG1-201ENST00000236698 GBP4Q96PP9 640 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 SUGT1Q9Y2Z0 365 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 NUP153P49790 1475 aaKnown RBP8.23□□□□□ -1.09
STAG1-201ENST00000236698 HOXA2O43364 376 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 PLIN1O60240 522 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 ATRIPQ8WXE1 791 aa8.23□□□□□ -1.09
STAG1-201ENST00000236698 ZNHIT6Q9NWK9 470 aaKnown RBP8.23□□□□□ -1.09
STAG1-201ENST00000236698 PPP4R3BQ5MIZ7 849 aa8.22□□□□□ -1.09
STAG1-201ENST00000236698 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
STAG1-201ENST00000236698 PANK3Q9H999 370 aa8.22□□□□□ -1.09
STAG1-201ENST00000236698 SMC3Q9UQE7 1217 aa8.22□□□□□ -1.09
STAG1-201ENST00000236698 ARHGEF12Q9NZN5 1544 aa8.22□□□□□ -1.09
STAG1-201ENST00000236698 SMYD5Q6GMV2 418 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms