RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
VEGFA-201ENST00000230480 NSD3Q9BZ95 1437 aa19.11■□□□□ 0.65
VEGFA-201ENST00000230480 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
VEGFA-201ENST00000230480 PANK3Q9H999 370 aa19.1■□□□□ 0.65
VEGFA-201ENST00000230480 SEPT12Q8IYM1 358 aa19.09■□□□□ 0.65
VEGFA-201ENST00000230480 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
VEGFA-201ENST00000230480 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
VEGFA-201ENST00000230480 UPF1Q92900 1129 aaKnown RBP eCLIP19.08■□□□□ 0.645e-12■□□□□ 9.5
VEGFA-201ENST00000230480 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
VEGFA-201ENST00000230480 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
VEGFA-201ENST00000230480 PEAK1Q9H792 1746 aa19.07■□□□□ 0.64
VEGFA-201ENST00000230480 EP400Q96L91 3159 aa19.07■□□□□ 0.64
VEGFA-201ENST00000230480 MAP3K19Q56UN5 1328 aa19.06■□□□□ 0.64
VEGFA-201ENST00000230480 ABCC6O95255 1503 aa19.06■□□□□ 0.64
VEGFA-201ENST00000230480 PER1O15534 1290 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-201ENST00000230480 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
VEGFA-201ENST00000230480 COG3Q96JB2 828 aa19.05■□□□□ 0.64
VEGFA-201ENST00000230480 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
VEGFA-201ENST00000230480 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
VEGFA-201ENST00000230480 CRB1P82279 1406 aa19.04■□□□□ 0.64
VEGFA-201ENST00000230480 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
VEGFA-201ENST00000230480 RGPD2P0DJD1 1756 aa19.04■□□□□ 0.64
VEGFA-201ENST00000230480 EVA1CP58658 441 aa19.03■□□□□ 0.64
VEGFA-201ENST00000230480 IP6K1Q92551 441 aa19.03■□□□□ 0.64
VEGFA-201ENST00000230480 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
VEGFA-201ENST00000230480 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
VEGFA-201ENST00000230480 WNK3Q9BYP7 1800 aa19.02■□□□□ 0.64
VEGFA-201ENST00000230480 RRS1Q15050 365 aaKnown RBP19.02■□□□□ 0.64
VEGFA-201ENST00000230480 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
VEGFA-201ENST00000230480 ERBB3P21860 1342 aa19.01■□□□□ 0.63
VEGFA-201ENST00000230480 TCP11L2Q8N4U5 519 aa19.01■□□□□ 0.63
VEGFA-201ENST00000230480 DISP2A7MBM2 1401 aa19■□□□□ 0.63
VEGFA-201ENST00000230480 HOXC9P31274 260 aa19■□□□□ 0.63
VEGFA-201ENST00000230480 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
VEGFA-201ENST00000230480 FAM182BQ5T319 152 aa19■□□□□ 0.63
VEGFA-201ENST00000230480 PARP4Q9UKK3 1724 aaKnown RBP19■□□□□ 0.63
VEGFA-201ENST00000230480 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
VEGFA-201ENST00000230480 KRT27Q7Z3Y8 459 aa18.97■□□□□ 0.63
VEGFA-201ENST00000230480 ANKRD24Q8TF21 1146 aa18.97■□□□□ 0.63
VEGFA-201ENST00000230480 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
VEGFA-201ENST00000230480 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
VEGFA-201ENST00000230480 FAM208AQ9UK61 1670 aaKnown RBP18.97■□□□□ 0.63
VEGFA-201ENST00000230480 CGNL1Q0VF96 1302 aa18.97■□□□□ 0.63
VEGFA-201ENST00000230480 HSP90AB2PQ58FF8 381 aa18.96■□□□□ 0.63
VEGFA-201ENST00000230480 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
VEGFA-201ENST00000230480 BLMP54132 1417 aaPredicted RBP18.96■□□□□ 0.63
VEGFA-201ENST00000230480 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
VEGFA-201ENST00000230480 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
VEGFA-201ENST00000230480 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
VEGFA-201ENST00000230480 NBPF6Q5VWK0 638 aa18.92■□□□□ 0.62
VEGFA-201ENST00000230480 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
VEGFA-201ENST00000230480 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-201ENST00000230480 INSRP06213 1382 aa18.91■□□□□ 0.62
VEGFA-201ENST00000230480 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
VEGFA-201ENST00000230480 AMPHP49418 695 aa18.9■□□□□ 0.62
VEGFA-201ENST00000230480 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
VEGFA-201ENST00000230480 KIF24Q5T7B8 1368 aa18.9■□□□□ 0.62
VEGFA-201ENST00000230480 MARCH10Q8NA82 808 aaPredicted RBP18.89■□□□□ 0.61
VEGFA-201ENST00000230480 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
VEGFA-201ENST00000230480 NSD2O96028 1365 aa18.89■□□□□ 0.61
VEGFA-201ENST00000230480 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
VEGFA-201ENST00000230480 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
VEGFA-201ENST00000230480 PTF1AQ7RTS3 328 aa18.88■□□□□ 0.61
VEGFA-201ENST00000230480 FLT4P35916 1363 aa18.88■□□□□ 0.61
VEGFA-201ENST00000230480 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
VEGFA-201ENST00000230480 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
VEGFA-201ENST00000230480 TNS1Q9HBL0 1735 aaKnown RBP18.88■□□□□ 0.61
VEGFA-201ENST00000230480 A0A0G2JS52 829 aa18.87■□□□□ 0.61
VEGFA-201ENST00000230480 MYT1Q01538 1121 aa18.87■□□□□ 0.61
VEGFA-201ENST00000230480 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
VEGFA-201ENST00000230480 MEGF6O75095 1541 aa18.85■□□□□ 0.61
VEGFA-201ENST00000230480 NPC1L1Q9UHC9 1359 aa18.85■□□□□ 0.61
VEGFA-201ENST00000230480 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
VEGFA-201ENST00000230480 USHBP1Q8N6Y0 703 aa18.84■□□□□ 0.61
VEGFA-201ENST00000230480 DDB1Q16531 1140 aa18.83■□□□□ 0.6
VEGFA-201ENST00000230480 MORC1Q86VD1 984 aa18.83■□□□□ 0.6
VEGFA-201ENST00000230480 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-201ENST00000230480 IL2RBP14784 551 aa18.82■□□□□ 0.6
VEGFA-201ENST00000230480 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
VEGFA-201ENST00000230480 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
VEGFA-201ENST00000230480 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
VEGFA-201ENST00000230480 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
VEGFA-201ENST00000230480 EYA1Q99502 592 aa18.82■□□□□ 0.6
VEGFA-201ENST00000230480 BCL9O00512 1426 aa18.82■□□□□ 0.6
VEGFA-201ENST00000230480 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
VEGFA-201ENST00000230480 RGPD1P0DJD0 1748 aa18.81■□□□□ 0.6
VEGFA-201ENST00000230480 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-201ENST00000230480 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
VEGFA-201ENST00000230480 TRIM37O94972 964 aa18.8■□□□□ 0.6
VEGFA-201ENST00000230480 EXOC5O00471 708 aa18.79■□□□□ 0.6
VEGFA-201ENST00000230480 OVOS2A0A0G2JMS6 1433 aa18.78■□□□□ 0.6
VEGFA-201ENST00000230480 IL13P35225 146 aa18.76■□□□□ 0.59
VEGFA-201ENST00000230480 MTHFSP49914 203 aa18.76■□□□□ 0.59
VEGFA-201ENST00000230480 CAMKK2Q96RR4 588 aa18.76■□□□□ 0.59
VEGFA-201ENST00000230480 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
VEGFA-201ENST00000230480 IGSF1Q8N6C5 1336 aa18.75■□□□□ 0.59
VEGFA-201ENST00000230480 KCNQ2O43526 872 aa18.75■□□□□ 0.59
VEGFA-201ENST00000230480 KAT6BQ8WYB5 2073 aa18.75■□□□□ 0.59
VEGFA-201ENST00000230480 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
VEGFA-201ENST00000230480 EN1Q05925 392 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms