RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Rad21Q61550 635 aaKnown RBP13.21□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Arid5bQ8BM75 1188 aaKnown RBP13.21□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 4933402E13RikQ9D4D2 429 aa13.21□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Ak9G3UYQ4 1894 aa13.21□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Dsg2O55111 1122 aa13.2□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Prex2Q3LAC4 1598 aa13.2□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Trbv21A0A0A6YX06 97 aa13.2□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Trappc8E9PWG2 1437 aa13.19□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Gm156Q58A37 223 aa13.19□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Ipo8Q7TMY7 1010 aa13.19□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Gabbr2Q80T41 940 aa13.19□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Mroh2aD3Z750 1679 aa13.18□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Rab3gap2Q8BMG7 1366 aa13.18□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Htatsf1Q8BGC0 757 aa13.18□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Kcnv2Q8CFS6 562 aa13.18□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Sulf1Q8K007 870 aa13.18□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Dixdc1Q80Y83 711 aa13.17□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Pdcl3Q8BVF2 240 aa13.17□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Dnmt1P13864 1620 aaKnown RBP13.17□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Cd109Q8R422 1442 aa13.17□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 B4galnt3Q6L8S8 986 aa13.17□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Dnajc14Q921R4 703 aa13.17□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 AnkarA2RT91 1465 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Atp7aQ64430 1491 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Esx1O88933 382 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Ppp2r1aQ76MZ3 589 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Neo1P97798 1493 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Gm16486A0A1D5RMD1 1434 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Ythdc2B2RR83 1445 aaKnown RBP13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Ssh2Q5SW75 1423 aa13.16□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Tie1Q06806 1134 aa13.15□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Spaca7Q9D2S4 182 aa13.15□□□□□ -0.3
Pdlim5-204ENSMUST00000168967 Chd1P40201 1711 aa13.15□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 PtprtQ99M80 1454 aa13.14□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Adamts13Q769J6 1426 aa13.14□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Fam208aQ69ZR9 1610 aaKnown RBP13.14□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Pola1P33609 1465 aa13.14□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Thap8E9Q695 213 aa13.14□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Ppp1r9bQ6R891 817 aaKnown RBP13.14□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Pola2P33611 600 aa13.13□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 FcrlaQ920A9 352 aa13.13□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Ccdc102aQ3TMW1 549 aa13.12□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 AU015836B2RUM3 263 aa13.12□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Fancd2Q80V62 1450 aa13.11□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Cfap74Q3UY96 1578 aa13.11□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Hecw1Q8K4P8 1604 aa13.11□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 CrbnQ8C7D2 445 aa13.11□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Adam19O35674 920 aa13.1□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Prr18Q6PAN7 307 aa13.1□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Gtf2a1Q99PM3 378 aa13.1□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Ifit1bl1D3Z6F0 470 aa13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Hsp90ab1P11499 724 aaKnown RBP13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Fam184bQ0KK56 942 aa13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Robo2Q7TPD3 1470 aa13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Nfxl1E9Q8I7 918 aaKnown RBP13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Ralbp1Q62172 648 aa13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Neurod2Q62414 383 aa13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Dbr1Q923B1 550 aa13.09□□□□□ -0.31
Pdlim5-204ENSMUST00000168967 Gm32742A0A1B0GT42 1604 aa13.08□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Rnf17Q99MV7 1640 aa13.08□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Ccdc183A2AJB1 534 aa13.08□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 MlecQ6ZQI3 291 aaKnown RBP13.08□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Ccdc30Q8BVF4 654 aa13.08□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Mroh3A0A1D5RM54 893 aa13.07□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Caskin2Q8VHK1 1201 aa13.07□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Znf521Q6KAS7 1311 aa13.07□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Kif20aP97329 887 aa13.07□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Dcaf11Q91VU6 549 aa13.07□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Speer4f1Q9D5Q6 258 aa13.07□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Usp19Q3UJD6 1360 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Trim30dE9PWL0 497 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Pknox2Q8BG99 474 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Fam221bQ8C627 487 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Stard8Q8K031 1019 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Eif2s2Q99L45 331 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Rrp7aQ9D1C9 280 aaKnown RBP13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Phf14Q9D4H9 881 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Srcin1Q9QWI6 1250 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Myom2Q14BI5 1463 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Itsn2Q9Z0R6 1659 aa13.06□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Edc4Q3UJB9 1406 aaKnown RBP13.05□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Tulp4Q9JIL5 1547 aa13.05□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Nsd2Q8BVE8 1365 aa13.05□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Os9Q8K2C7 672 aa13.04□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Pdcd11Q6NS46 1862 aaKnown RBP13.04□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 ZfrO88532 1074 aaKnown RBP13.03□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Rrp9Q91WM3 475 aaKnown RBP13.03□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Trim58Q5NCC9 485 aa13.02□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Gprasp1Q5U4C1 1347 aa13.02□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Fam135bQ9DAI6 1403 aa13.02□□□□□ -0.32
Pdlim5-204ENSMUST00000168967 Arhgap5P97393 1501 aa13.02□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Rnf40Q3U319 1001 aa13.02□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 NntQ61941 1086 aaKnown RBP13.02□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Ncbp3Q8BZR9 615 aaKnown RBP13.02□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Sptbn5F6UCX4 1208 aa13.01□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Uspl1Q3ULM6 1089 aa13.01□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Golga2Q921M4 999 aa13.01□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Uggt2E9Q4X2 1504 aa13.01□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Kdm5aQ3UXZ9 1690 aa13.01□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Adamts19P59509 1210 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms