RNA–Protein interactions for RNA: ENSMUST00000117601.7

Limch1-203, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 5 BASIC

Gene Limch1, Length 3,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-203ENSMUST00000117601 GnpatP98192 678 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 Ncbp3Q8BZR9 615 aaKnown RBP10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 FancaQ9JL70 1439 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 CastP51125 788 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 Abcc10Q8R4P9 1501 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 Ttc41Q692V3 1318 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 Slain2Q8CI08 581 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 Sirt1Q923E4 737 aa10.61□□□□□ -0.71
Limch1-203ENSMUST00000117601 Aplp1Q03157 653 aa10.6□□□□□ -0.71
Limch1-203ENSMUST00000117601 Irx6Q9ER75 438 aa10.6□□□□□ -0.71
Limch1-203ENSMUST00000117601 Cdc37l1Q9CZP7 335 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Fchsd2Q3USJ8 740 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Ggnbp2Q5SV77 696 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Stk31Q99MW1 1018 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Ttll13A4Q9F6 804 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Eya1P97767 591 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Gtf2a1Q99PM3 378 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Tns3Q5SSZ5 1440 aa10.59□□□□□ -0.71
Limch1-203ENSMUST00000117601 Ankrd50F7BE84 1390 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Alpk3Q924C5 1678 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Duxf3A0A0N4SV92 674 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Fyb1O35601 819 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Cluap1Q8R3P7 413 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Usp16Q99LG0 825 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Kif20bQ80WE4 1774 aaKnown RBP10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Astn2Q80Z10 1352 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Bcl9Q9D219 1425 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Trim58Q5NCC9 485 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Rlbp1Q9Z275 317 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 C3P01027 1663 aa10.58□□□□□ -0.72
Limch1-203ENSMUST00000117601 Prim1P20664 417 aa10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 N4bp2F8VQG7 1678 aaKnown RBP10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 Arap3Q8R5G7 1538 aa10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 Samd1D3YXK1 519 aa10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 Med1Q925J9 1575 aa10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 D430041D05RikF6ZGR6 1678 aa10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 Parp14Q2EMV9 1817 aa10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 Ythdc1E9Q5K9 736 aaKnown RBP10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 TmpoQ61033 693 aaKnown RBP10.57□□□□□ -0.72
Limch1-203ENSMUST00000117601 Kdm2bQ6P1G2 1309 aa10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 Ttc21aQ8C0S4 1314 aa10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 G3bp1P97855 465 aaKnown RBP10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 Egfem1Q8C088 590 aa10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 Rims2Q9EQZ7 1530 aa10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 Camta1A2A891 1682 aa10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 Pik3c2aQ61194 1686 aa10.56□□□□□ -0.72
Limch1-203ENSMUST00000117601 Hoxc9P09633 260 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Hoxb7P09024 217 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 DekQ7TNV0 380 aaKnown RBP10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Maco1Q7TQE6 664 aaKnown RBP10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Chmp5Q9D7S9 219 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 C5P06684 1680 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Sipa1l2Q80TE4 1722 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Amigo3Q8C2S7 508 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Amotl2Q8K371 772 aa10.55□□□□□ -0.72
Limch1-203ENSMUST00000117601 Kif1aP33173 1695 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Als2Q920R0 1651 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Vamp4O70480 141 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 4930567H17RikQ3V0K5 233 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Dnajc10Q9DC23 793 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 NalcnQ8BXR5 1738 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Znf335A2A5K6 1337 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Znf692Q3U381 531 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Plekhm2Q80TQ5 1018 aa10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Mbd3Q9Z2D8 285 aaKnown RBP10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Cdk12Q14AX6 1484 aaKnown RBP10.54□□□□□ -0.72
Limch1-203ENSMUST00000117601 Tnnt1O88346 262 aa10.53□□□□□ -0.72
Limch1-203ENSMUST00000117601 TatQ8QZR1 454 aa10.53□□□□□ -0.72
Limch1-203ENSMUST00000117601 Zfp91Q62511 572 aa10.53□□□□□ -0.72
Limch1-203ENSMUST00000117601 Tmem2Q5FWI3 1383 aa10.52□□□□□ -0.72
Limch1-203ENSMUST00000117601 Aifm3Q3TY86 605 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 CemipQ8BI06 1361 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 PaskQ8CEE6 1383 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 Rimbp3Q3V0F0 1606 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 Gnai1B2RSH2 354 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 Pnmal2G3X9N3 661 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 Q3UPC7 1272 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 4933416C03RikQ3V063 378 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 Gnai3Q9DC51 354 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 Uhrf1bp1B2KF50 1429 aa10.52□□□□□ -0.73
Limch1-203ENSMUST00000117601 NudcO35685 332 aaKnown RBP10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Rrp9Q91WM3 475 aaKnown RBP10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Map2P20357 1828 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Rapgef3Q8VCC8 918 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Ciz1Q8VEH2 845 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Farp2Q91VS8 1065 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Iqcf3Q9D498 203 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Wdr17E9Q271 1322 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Col14a1Q80X19 1797 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Znf326O88291 580 aa10.51□□□□□ -0.73
Limch1-203ENSMUST00000117601 Znf521Q6KAS7 1311 aa10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Dzip1Q8BMD2 852 aa10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Smc5Q8CG46 1101 aaKnown RBP10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Col16a1Q8BLX7 1580 aa10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Ubr1O70481 1757 aa10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Nsd3Q6P2L6 1439 aa10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Rtf1A2AQ19 715 aaKnown RBP10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 Q8BT18 775 aa10.5□□□□□ -0.73
Limch1-203ENSMUST00000117601 AU019823E9PUQ3 292 aa10.49□□□□□ -0.73
Limch1-203ENSMUST00000117601 Atf3Q60765 181 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms