RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 SrrtQ99MR6 875 aaKnown RBP9.05□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Nsd2Q8BVE8 1365 aa9.05□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Gm9992B2RWK3 458 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 MccE9PWI3 1003 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Ppip5k2Q6ZQB6 1129 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Unc93aQ710D3 458 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Ccdc60Q8C4J0 545 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Kif2aP28740 705 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Filip1lQ6P6L0 1131 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Nop14Q8R3N1 860 aaKnown RBP9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Dmrtc1Q9D9R7 182 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Fbxo3Q9DC63 480 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 NhsB1AV60 1647 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Edc4Q3UJB9 1406 aaKnown RBP9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Smarce1O54941 411 aaKnown RBP9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Stk11ipQ3TAA7 1072 aa9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Eif4g2Q62448 906 aaKnown RBP9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 U2af1Q9D883 239 aaKnown RBP9.04□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Mast1Q9R1L5 1570 aa9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Tshz1Q5DTH5 1084 aa9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Maco1Q7TQE6 664 aaKnown RBP9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Zkscan5Q9Z1D8 819 aa9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Calcoco2A2A6M5 331 aa9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Abcc3B2RX12 1523 aa9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Ccdc171E9Q1U1 1324 aa9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 Anp32eP97822 260 aaKnown RBP9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 G3bp1P97855 465 aaKnown RBP9.03□□□□□ -0.96
Bdnf-204ENSMUST00000111044 CastP51125 788 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Kank4Q6P9J5 1016 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gtf2e1Q9D0D5 440 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Col17a1Q07563 1470 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Srpk2O54781 681 aaKnown RBP9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Fan1Q69ZT1 1020 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Arid4aF8VPQ2 1261 aaKnown RBP9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 LifrP42703 1092 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Mcm2P97310 904 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Dixdc1Q80Y83 711 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Inpp5bQ8K337 993 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Sf3a1Q8K4Z5 791 aaKnown RBP9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Tbc1d8Q9Z1A9 1134 aa9.02□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Cdc42bpbQ7TT50 1713 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 CenpqQ9CPQ5 267 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gprasp1Q5U4C1 1347 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gadd45bP22339 160 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Chd1P40201 1711 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 NexnQ7TPW1 607 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Znf771Q8BJ90 317 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Cc2d1aQ8K1A6 943 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Otud6bQ8K2H2 294 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ciz1Q8VEH2 845 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 4930548H24RikQ9D496 437 aa9.01□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ttc21bQ0HA38 1315 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Elp1Q7TT37 1333 aaKnown RBP9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gtpbp6Q3U6U5 514 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Nxf2Q4ZGD8 691 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Hmgn5Q9JL35 406 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Mmel1Q9JLI3 765 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Atp2b2Q9R0K7 1198 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Abca8bQ8K440 1620 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ppip5k1A2ARP1 1436 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Arhgap4B1AUY3 965 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Zfp597E9Q6S0 419 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Zfp397Q7TNK4 527 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Tmco5bQ80X59 307 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 CarsQ9ER72 831 aaKnown RBP9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Med4Q9CQA5 270 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gcc1Q9D4H2 778 aa9□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Brpf1B2RRD7 1212 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ms4a1P19437 291 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Tsen2Q6P7W5 460 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 CenppQ9CZ92 286 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Neurl4Q5NCX5 1563 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Usp54Q8BL06 1588 aaKnown RBP8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Rtf1A2AQ19 715 aaKnown RBP8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Oas2E9Q9A9 742 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ccdc96Q9CR92 584 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Adamts13Q769J6 1426 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 PtprtQ99M80 1454 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Tpm1P58771 284 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Usp40Q8BWR4 1235 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ddx41Q91VN6 622 aaKnown RBP8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Kiaa1107Q80TK0 1369 aa8.99□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Pdcd11Q6NS46 1862 aaKnown RBP8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Zmynd15Q8C0R7 736 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 IqubQ8CDK3 788 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 AnlnQ8K298 1121 aaKnown RBP8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 KinQ8K339 391 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 PdcQ9QW08 244 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 ErbinQ80TH2 1402 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gm45015A0A140LII9 184 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gm18336A0A140LIU8 765 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Ess2O70279 479 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Cnga1P29974 684 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 CtifQ6PEE2 600 aaKnown RBP8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Cyp27a1Q9DBG1 533 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Gdpd2Q9ESM6 539 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Kiaa1210E9Q0C6 1637 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Pola1P33609 1465 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Prdm4Q80V63 803 aa8.98□□□□□ -0.97
Bdnf-204ENSMUST00000111044 Pabpn1Q8CCS6 302 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms