RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Top2aQ01320 1528 aaKnown RBP9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Larp1Q6ZQ58 1072 aaKnown RBP9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Als2cr12Q8BVM7 383 aa9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Arhgef5E9Q7D5 1581 aa9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 CrcpO35427 148 aa9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Smarca5Q91ZW3 1051 aaKnown RBP9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Cep57l1Q8VDS7 400 aa9.49□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Cep135Q6P5D4 1140 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Smc4Q8CG47 1286 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Smc1bQ920F6 1248 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ift140E9PY46 1464 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Myom3A2ABU4 1439 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Smarca4Q3TKT4 1613 aaKnown RBP9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Serpinb6bO08804 377 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Spag17Q5S003 2320 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 NmiO35309 314 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 PdiltQ9DAN1 588 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Mmel1Q9JLI3 765 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Srgap3Q812A2 1099 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Cc2d2bA0A286YDU8 1405 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Cwc27Q3TKY6 469 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Bbof1Q3V079 533 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 ErbinQ80TH2 1402 aa9.48□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Rad54l2Q99NG0 1466 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Fam114a1Q9D281 569 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Gm21190A0A0G2JGJ6 266 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Hspa4Q61316 841 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Abl1P00520 1123 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Fam107bQ3TGF2 131 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ccdc96Q9CR92 584 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Tbc1d32Q3URV1 1296 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Shq1Q7TMX5 569 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Fez2Q6TYB5 348 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Vps37cQ8R105 352 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Ap3b2Q9JME5 1082 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Vps18Q8R307 973 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Dydc1Q9D9T0 175 aa9.47□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Paxbp1P58501 919 aa9.46□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Gm18336A0A140LIU8 765 aa9.46□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Dhx16G3X8X0 1044 aaKnown RBP9.46□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Rab11fip3Q8CHD8 1047 aa9.46□□□□□ -0.89
Scn8a-204ENSMUST00000108909 Plekhg5Q66T02 1073 aa9.46□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Snw1Q9CSN1 536 aaKnown RBP9.46□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Rbm28Q8CGC6 750 aaKnown RBP9.46□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Erich4Q3UNU4 136 aa9.46□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ppp6r1Q7TSI3 856 aa9.46□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Soga1E1U8D0 1418 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gsto1O09131 240 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Stim1P70302 685 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Chd1lQ9CXF7 900 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ppm1eQ80TL0 749 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ccdc73Q8CDM4 1066 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Egfem1Q8C088 590 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gigyf1Q99MR1 1044 aaKnown RBP9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gm10471E9Q1C7 252 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Bcl11bQ99PV8 884 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gon4lQ9DB00 2260 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Cdc45Q9Z1X9 566 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ctr9Q62018 1173 aaKnown RBP9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Kank1E9Q238 1360 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Zkscan7E9PVW1 718 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 BcanQ61361 883 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 MvpQ9EQK5 861 aa9.45□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Stx1aO35526 288 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Commd10Q8JZY2 202 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Cabp2Q9JLK4 216 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Nol8Q3UHX0 1147 aaKnown RBP9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tbc1d9Q3UYK3 1264 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Atxn3Q9CVD2 355 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gjb2Q00977 226 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 LarsQ8BMJ2 1178 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Chmp7Q8R1T1 451 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Il4rP16382 810 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 DonsonQ9QXP4 560 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Pafah1b1P63005 410 aaKnown RBP9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Sycp2Q9CUU3 1500 aa9.44□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tax1bp1Q3UKC1 814 aaKnown RBP9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ddx58Q6Q899 926 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Cep89Q9CZX2 791 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Zmym4A2A791 1549 aaKnown RBP9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Crybg2B7ZCC2 1516 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Nucb2P81117 420 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Pde4dipQ80YT7 2224 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Catsper2A2ARP9 588 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 WrnO09053 1401 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Sparcl1P70663 650 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 MpripP97434 1024 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ripply1Q2WG77 201 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ncapg2Q6DFV1 1138 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gzf1Q4VBD9 706 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Cdc37l1Q9CZP7 335 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 EvcP57680 1005 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Puf60Q3UEB3 564 aaKnown RBP9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ssr1Q9CY50 286 aaKnown RBP9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Kdm4aQ8BW72 1064 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Tango6Q8C3S2 1079 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Themis2Q91YX0 663 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Gtpbp4Q99ME9 634 aaKnown RBP9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 IncenpQ9WU62 880 aa9.43□□□□□ -0.9
Scn8a-204ENSMUST00000108909 Ercc3P49135 783 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms