RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Spryd7Q3TFQ1 196 aa12.09□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 ErfeQ6PGN1 340 aa12.09□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Larp1Q6ZQ58 1072 aaKnown RBP12.09□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 GlmnQ8BZM1 596 aa12.09□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 TatQ8QZR1 454 aa12.09□□□□□ -0.47
Ccdc54-201ENSMUST00000062439 Arhgef10lA2AWP8 1280 aa12.08□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 DiexfQ8BTT6 772 aaKnown RBP12.08□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Edem1Q925U4 652 aa12.08□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 4933416C03RikQ3V063 378 aa12.07□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Znf280cQ6P3Y5 742 aa12.07□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Znf316Q6PGE4 1016 aa12.07□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 ArafP04627 604 aa12.06□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Rnf20Q5DTM8 973 aa12.06□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Mtnr1bQ8CIQ6 364 aa12.06□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Hdac6Q9Z2V5 1149 aa12.06□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Serbp1Q9CY58 407 aaKnown RBP12.05□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Trim30cD3YVI9 513 aa12.04□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 BhmtO35490 407 aaKnown RBP12.04□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 DxoO70348 397 aa12.04□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Laptm5Q61168 261 aa12.04□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Crispld1Q8CGD2 500 aa12.04□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Capn5O08688 640 aaKnown RBP12.03□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Hoxd8P23463 289 aa12.03□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 CgasQ8C6L5 507 aa12.03□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Ascc2Q91WR3 749 aa12.03□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Ivns1abpQ920Q8 642 aa12.03□□□□□ -0.48
Ccdc54-201ENSMUST00000062439 Cdh15P33146 784 aa12.02□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 InhbbQ04999 411 aa12.02□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Gm11487Q5RIS0 354 aa12.02□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Ap1g2O88512 791 aa12.01□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 PrkcshO08795 521 aa12□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 ArsbP50429 534 aa12□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Rpa1Q8VEE4 623 aaKnown RBP12□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Guca2aP33680 116 aa11.99□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 ParnQ8VDG3 624 aa11.99□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 BicraF8VPZ9 1578 aa11.99□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Rb1cc1Q9ESK9 1588 aa11.98□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Dlgap3Q6PFD5 977 aa11.98□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 GneQ91WG8 722 aaKnown RBP11.98□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Bfsp1A2AMT1 669 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Slc4a9E9PUP3 929 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Lrrc32G3XA59 663 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Magea1O89006 320 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Ddit3P35639 168 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Tpp2Q64514 1262 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Traf7Q922B6 594 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Cxxc1Q9CWW7 660 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Eya4Q9Z191 616 aa11.97□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Arid3cA6PWV5 409 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Rab6bP61294 208 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 CalcaP70160 136 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Cep120Q7TSG1 988 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Zbtb33Q8BN78 671 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Gtpbp3Q923K4 492 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Cables1Q9ESJ1 568 aa11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Utp3Q9JI13 469 aaKnown RBP11.96□□□□□ -0.49
Ccdc54-201ENSMUST00000062439 Hcn4O70507 1186 aa11.95□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Zfand3Q497H0 227 aa11.95□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Ccdc85aQ5SP85 500 aa11.95□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Morc2bQ8C5W4 1022 aa11.95□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Rbck1Q9WUB0 508 aa11.95□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Kcng1A2BDX4 514 aa11.94□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Abtb2Q7TQI7 1024 aa11.94□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Trim47Q8C0E3 641 aa11.94□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Atxn7Q8R4I1 867 aa11.94□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Tgm5Q9D7I9 724 aa11.94□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Brpf3B2KF05 1204 aaKnown RBP11.93□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Atp9bP98195 1146 aa11.93□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Puf60Q3UEB3 564 aaKnown RBP11.93□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Gm13101A2ASJ0 481 aa11.92□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 PurbO35295 324 aaKnown RBP11.92□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 PtprcP06800 1291 aa11.92□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Eif4bQ8BGD9 611 aaKnown RBP11.92□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Epb41l5Q8BGS1 731 aa11.92□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Col26a1Q91VF6 440 aa11.92□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Gm11758A2BEI6 360 aa11.91□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Gm11757A2BEI8 360 aa11.91□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Xirp1O70373 1129 aa11.91□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 SrrtQ99MR6 875 aaKnown RBP11.91□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Irf1P15314 329 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Smyd5Q3TYX3 416 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Sgsm1Q8BPQ7 1093 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Dpp9Q8BVG4 862 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 MlycdQ99J39 492 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 MpstQ99J99 297 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 SrfQ9JM73 504 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Ccdc180J3QNE4 1664 aa11.9□□□□□ -0.5
Ccdc54-201ENSMUST00000062439 Pak2Q8CIN4 524 aa11.89□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Dph6Q9CQ28 267 aa11.89□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Ripk4Q9ERK0 786 aa11.89□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Cacna1iE9Q7P2 2199 aa11.89□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Gnrh1P13562 90 aa11.88□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Siah2Q06986 325 aa11.88□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Rnf223Q3UV31 285 aa11.88□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Snd1Q78PY7 910 aaKnown RBP11.88□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 P01647 108 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 VdrP48281 422 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Tlr7P58681 1050 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Crtc2Q3U182 692 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Art1Q60935 325 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms