RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Erich6bQ9D4S6 220 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Ppip5k1A2ARP1 1436 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Lamc1P02468 1607 aaKnown RBP8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Kdm5cP41230 1554 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Usp19Q3UJD6 1360 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Atf3Q60765 181 aa8.51□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Rnf17Q99MV7 1640 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Nckap5lQ6GQX2 1323 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Gm21698A0A087WQP8 267 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Gm21671G3UY31 267 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Rab11fip3Q8CHD8 1047 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Sptbn5F6UCX4 1208 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Vamp4O70480 141 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Dnajc5gQ8C632 165 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Acsbg1Q99PU5 721 aa8.5□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Cnnm1Q0GA42 951 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 BcanQ61361 883 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Pola1P33609 1465 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Naip7Q9JIB3 1402 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Chpf2Q3UU43 768 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Tceal9Q9DD24 104 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Trpm2Q91YD4 1506 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Idi1P58044 227 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 CrebrfQ8CDG5 640 aaKnown RBP8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Skint5A7XUY5 1461 aa8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Scaf11E9PZM7 1456 aaKnown RBP8.49□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Kdm2bQ6P1G2 1309 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Gnai2P08752 355 aaKnown RBP8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Babam1Q3UI43 333 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Gsdma3Q5Y4Y6 464 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Cetn4Q8K4K1 168 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 FanclQ9CR14 375 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Znf692Q3U381 531 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Rsph3aQ3UFY4 516 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Jarid2Q62315 1234 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Casc1Q6TDU8 730 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 GphnQ8BUV3 769 aaKnown RBP8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Iffo2Q8R2V2 512 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Nphp1Q9QY53 687 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Hfm1D3Z4R1 1434 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 PogkQ80TC5 607 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Fndc1E9Q043 1732 aa8.48□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Fmnl2A2APV2 1086 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 FosbP13346 338 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Nos1Q9Z0J4 1429 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Casq1O09165 405 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Bcar3Q9QZK2 820 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Lmod3E9QA62 571 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Eya1P97767 591 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Btbd11Q6GQW0 1109 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Frmpd2A0A140LI67 1392 aa8.47□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Ankrd50F7BE84 1390 aa8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Ankrd44B2RXR6 993 aa8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Jakmip1Q8BVL9 626 aa8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Q8C5K5 320 aa8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Ddx54Q8K4L0 874 aaKnown RBP8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Ppp1r42Q8R1Z4 357 aa8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Bcl11bQ99PV8 884 aa8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 HdgfP51859 237 aaKnown RBP8.46□□□□□ -1.05
Col6a6-201ENSMUST00000060896 Adamts13Q769J6 1426 aa8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Tbc1d9Q3UYK3 1264 aa8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ddx17Q501J6 650 aaKnown RBP8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Tshz3Q8CGV9 1081 aa8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Talpid3E9PV87 1520 aa8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Filip1lQ6P6L0 1131 aa8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ppp1r9bQ6R891 817 aaKnown RBP8.46□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Pdcd11Q6NS46 1862 aaKnown RBP8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Nol10Q5RJG1 687 aaKnown RBP8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Speer4bQ9D9F7 267 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Dnajc10Q9DC23 793 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Efcab6Q6P1E8 1516 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 NpatQ8BMA5 1420 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Sirt1Q923E4 737 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm32742A0A1B0GT42 1604 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Kif21bQ9QXL1 1668 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Nkx1-2P42580 305 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Zap70P43404 618 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 TimelessQ9R1X4 1197 aa8.45□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Nol8Q3UHX0 1147 aaKnown RBP8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Trim27Q62158 513 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ssh1Q76I79 1042 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Atp10aO54827 1508 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Abcc3B2RX12 1523 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm21680A0A0G2JGR8 267 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Slc35g1Q8BY79 368 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ppip5k2Q6ZQB6 1129 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Rnf214Q8BFU3 668 aaKnown RBP8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Fam13aQ8BGI4 693 aa8.44□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm21663A0A0G2JE01 267 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Wdr63B2RY71 923 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm7361D3Z6R1 267 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 5031410I06RikE9Q4E0 267 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm1979E9QAN3 267 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Zkscan2G3X952 960 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm5862K7N5V5 267 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Gm10220K7N660 267 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Cpa2Q504N0 417 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Ptpdc1Q6NZK8 747 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Nsd3Q6P2L6 1439 aa8.43□□□□□ -1.06
Col6a6-201ENSMUST00000060896 Neurl4Q5NCX5 1563 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms