RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ccer1Q9CQL2 403 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Chmp4cQ9D7F7 232 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 AlkP97793 1621 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Kdm5cP41230 1554 aa14.43□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Srgap3Q812A2 1099 aa14.43□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Kiaa1551Q5DTW7 1521 aa14.43□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Kdm6bQ5NCY0 1641 aa14.43□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Slc5a4bQ91ZP4 660 aa14.43□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Sytl4Q9R0Q1 673 aa14.43□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Lmod3E9QA62 571 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Rapgef4Q9EQZ6 1011 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Gm973E9Q295 1059 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Fbln2P37889 1221 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Ccdc155Q80VJ8 648 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 VgfQ0VGU4 617 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Tpd52l1O54818 204 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Slc5a1Q8C3K6 665 aa14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Usp54Q8BL06 1588 aaKnown RBP14.42□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Zmym3Q9JLM4 1370 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Dmrt2Q8BG36 561 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Ttc19Q8CC21 365 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Mapk8ip1Q9WVI9 707 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Depdc5P61460 1591 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 AatkQ80YE4 1365 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Hoxb7P09024 217 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Tmem132eQ6IEE6 982 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Gcc1Q9D4H2 778 aa14.41□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Skint5A7XUY5 1461 aa14.4□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Dnmt1P13864 1620 aaKnown RBP14.4□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Tspyl2Q7TQI8 677 aa14.4□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Aldh1l1Q8R0Y6 902 aa14.4□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Mroh2aD3Z750 1679 aa14.4□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Mre11Q61216 706 aa14.4□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Kif1bQ60575 1816 aaKnown RBP14.39□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Pola1P33609 1465 aa14.39□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Nap1l3Q794H2 544 aa14.39□□□□□ -0.11
Pcif1-201ENSMUST00000041643 CastP51125 788 aa14.38□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Plekhm2Q80TQ5 1018 aa14.38□□□□□ -0.11
Pcif1-201ENSMUST00000041643 PzpQ61838 1495 aa14.38□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Ppip5k1A2ARP1 1436 aa14.38□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Bicdl1A0JNT9 577 aa14.37□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Trim34aQ99PP6 485 aa14.37□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Trim34bJ3QNR8 485 aa14.37□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Fkbp5Q64378 456 aa14.37□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Cplx2P84086 134 aa14.37□□□□□ -0.11
Pcif1-201ENSMUST00000041643 PtprtQ99M80 1454 aa14.37□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Cog6Q8R3I3 657 aa14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 CarsQ9ER72 831 aaKnown RBP14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Nphp4P59240 1425 aa14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Strn4P58404 760 aa14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Ankib1Q6ZPS6 1085 aa14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Nol8Q3UHX0 1147 aaKnown RBP14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Uggt2E9Q4X2 1504 aa14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Smc3Q9CW03 1217 aaKnown RBP14.36□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Kif18aQ91WD7 886 aa14.35□□□□□ -0.11
Pcif1-201ENSMUST00000041643 FosbP13346 338 aa14.35□□□□□ -0.11
Pcif1-201ENSMUST00000041643 PaskQ8CEE6 1383 aa14.35□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Astn2Q80Z10 1352 aa14.35□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Nlrp3Q8R4B8 1033 aa14.35□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Srek1Q8BZX4 494 aaKnown RBP14.34□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Uspl1Q3ULM6 1089 aa14.34□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Ccp110Q7TSH4 1004 aa14.34□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Klc3Q91W40 508 aa14.34□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Psma5Q9Z2U1 241 aaKnown RBP14.34□□□□□ -0.11
Pcif1-201ENSMUST00000041643 Chpf2Q3UU43 768 aa14.33□□□□□ -0.11
Pcif1-201ENSMUST00000041643 NgdnQ9DB96 315 aaKnown RBP14.33□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Eif4a2P10630 407 aa14.33□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Aplp1Q03157 653 aa14.33□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Evc2Q8K1G2 1220 aa14.33□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Adam1bQ8R534 806 aa14.33□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Sf3a1Q8K4Z5 791 aaKnown RBP14.33□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Gm21969J3QJZ1 289 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Klhdc4Q921I2 584 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Map3k19E9Q3S4 1311 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Pde4bB1AWC9 736 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Tom1O88746 492 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Cchcr1Q8K2I2 770 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Amotl2Q8K371 772 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Stk11ipQ3TAA7 1072 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Ints3Q7TPD0 1041 aaKnown RBP14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Mical1Q8VDP3 1048 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Plch2A2AP18 1501 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Abl1P00520 1123 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Rsph6aQ8CDR2 708 aa14.32□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Edc4Q3UJB9 1406 aaKnown RBP14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Atp10aO54827 1508 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Prl7d1P04769 244 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Jmjd4Q8BFT6 427 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 OptnQ8K3K8 584 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Washc4Q3UMB9 1173 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Q3UPC7 1272 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Cdc42bpaQ3UU96 1719 aa14.31□□□□□ -0.12
Pcif1-201ENSMUST00000041643 SlkO54988 1233 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Exoc5Q3TPX4 708 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Dnajc10Q9DC23 793 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Atf7ipQ7TT18 1306 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Kif21bQ9QXL1 1668 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Me1P06801 572 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Sbno1Q689Z5 1390 aa14.3□□□□□ -0.12
Pcif1-201ENSMUST00000041643 Vps53Q8CCB4 832 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms