RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Uhrf1bp1lA2RSJ4 1457 aa11.06□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Supt5hO55201 1082 aaKnown RBP11.06□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Taok3Q8BYC6 898 aa11.05□□□□□ -0.64
Ssr3-201ENSMUST00000029414 TatQ8QZR1 454 aa11.05□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Cabp4Q8VHC5 271 aa11.05□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Ptpn23Q6PB44 1692 aa11.05□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Cwc22Q8C5N3 908 aaKnown RBP11.04□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Kdm2bQ6P1G2 1309 aa11.04□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Ppp6r1Q7TSI3 856 aa11.04□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Nol11Q8BJW5 723 aaKnown RBP11.04□□□□□ -0.64
Ssr3-201ENSMUST00000029414 RgmbQ7TQ33 436 aa11.04□□□□□ -0.64
Ssr3-201ENSMUST00000029414 ArxO35085 564 aa11.03□□□□□ -0.64
Ssr3-201ENSMUST00000029414 4930523C07RikE9Q2T4 99 aa11.03□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Ahnak2E9PYB0 1738 aaKnown RBP11.02□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Slc4a1apE9PX68 744 aa11.02□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Parp14Q2EMV9 1817 aa11.02□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Mst1rQ62190 1378 aa11.02□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Vps33bP59016 617 aa11.02□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Smg6P61406 1418 aaKnown RBP11.01□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Adgrb1Q3UHD1 1582 aa11□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Abca3Q8R420 1704 aa11□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Ubap1lG3UW59 384 aa10.99□□□□□ -0.65
Ssr3-201ENSMUST00000029414 CrklP47941 303 aa10.99□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Pknox2Q8BG99 474 aa10.99□□□□□ -0.65
Ssr3-201ENSMUST00000029414 OptnQ8K3K8 584 aa10.99□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Ankrd23Q812A3 306 aa10.98□□□□□ -0.65
Ssr3-201ENSMUST00000029414 OscarQ8VBT3 265 aa10.98□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Plekhd1B2RPU2 505 aa10.98□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Fam184bQ0KK56 942 aa10.98□□□□□ -0.65
Ssr3-201ENSMUST00000029414 PrxO55103 1391 aa10.98□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Tmem132eQ6IEE6 982 aa10.98□□□□□ -0.65
Ssr3-201ENSMUST00000029414 IbtkQ6ZPR6 1352 aaKnown RBP10.97□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Ginm1Q91WR6 327 aa10.97□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Hoxb7P09024 217 aa10.97□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Hoxc9P09633 260 aa10.97□□□□□ -0.65
Ssr3-201ENSMUST00000029414 GakQ99KY4 1305 aa10.97□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Prdm10Q3UTQ7 1184 aa10.96□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Pak3Q61036 559 aa10.96□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Slc24a1Q91WD8 1130 aa10.96□□□□□ -0.65
Ssr3-201ENSMUST00000029414 Apba2P98084 750 aa10.96□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Sin3aQ60520 1274 aaKnown RBP10.96□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Tmf1B9EKI3 1091 aa10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Ddb1Q3U1J4 1140 aaKnown RBP10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Zpr1Q62384 459 aa10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Rad17Q6NXW6 688 aa10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 PappaQ8R4K8 1624 aa10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Zcrb1Q9CZ96 217 aaKnown RBP10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Col15a1O35206 1367 aa10.95□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Rab3gap2Q8BMG7 1366 aa10.94□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Birc3O08863 600 aa10.94□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Sik1Q60670 779 aa10.93□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Nsd3Q6P2L6 1439 aa10.93□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Lrit1Q8K099 624 aa10.93□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Pank3Q8R2W9 370 aa10.93□□□□□ -0.66
Ssr3-201ENSMUST00000029414 TkfcQ8VC30 578 aa10.93□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Kcnh4A2A5F7 1018 aa10.92□□□□□ -0.66
Ssr3-201ENSMUST00000029414 GalcP54818 684 aa10.92□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Shank3Q4ACU6 1730 aa10.92□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Gprasp1Q5U4C1 1347 aa10.92□□□□□ -0.66
Ssr3-201ENSMUST00000029414 ClspnQ80YR7 1315 aa10.92□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Ppfibp2O35711 882 aa10.91□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Exoc5Q3TPX4 708 aa10.91□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Kdm6aO70546 1401 aa10.91□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Zranb3Q6NZP1 1069 aa10.91□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Vars2Q3U2A8 1060 aa10.9□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Inpp5dQ9ES52 1191 aa10.9□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Simc1E9Q6E9 1354 aa10.9□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Dcaf11Q91VU6 549 aa10.9□□□□□ -0.66
Ssr3-201ENSMUST00000029414 Pnpla7A2AJ88 1352 aa10.9□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Ccne1Q61457 408 aa10.89□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Cc2d1aQ8K1A6 943 aa10.89□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Spef2Q8C9J3 1734 aa10.89□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Erbb3Q61526 1339 aa10.88□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Snapc4Q8BP86 1333 aa10.88□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Plekhg5Q66T02 1073 aa10.88□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Elp1Q7TT37 1333 aaKnown RBP10.88□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Arhgap33Q80YF9 1305 aa10.88□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Gm10471E9Q1C7 252 aa10.87□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Zscan10Q3URR7 782 aa10.87□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Afg3l2Q8JZQ2 802 aaKnown RBP10.86□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Ezh2Q61188 746 aaKnown RBP10.86□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Bsdc1Q80Y55 427 aa10.86□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Tjp1P39447 1745 aaKnown RBP10.85□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Ppp1r37Q8BKR5 712 aa10.84□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Sos2Q02384 1333 aa10.84□□□□□ -0.67
Ssr3-201ENSMUST00000029414 Fam50bQ9WTJ8 334 aa10.83□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Trim28Q62318 834 aa10.83□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Eif4a2P10630 407 aa10.83□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Pim2Q62070 370 aa10.83□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Gm21680A0A0G2JGR8 267 aa10.82□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Eya1P97767 591 aa10.82□□□□□ -0.68
Ssr3-201ENSMUST00000029414 4930572O03RikQ8C5Y0 211 aa10.82□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Tns2Q8CGB6 1400 aa10.81□□□□□ -0.68
Ssr3-201ENSMUST00000029414 ThemisQ8BGW0 636 aa10.81□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Speer4bQ9D9F7 267 aa10.81□□□□□ -0.68
Ssr3-201ENSMUST00000029414 PnisrA2AJT4 805 aaKnown RBP10.8□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Ppp1r15aP17564 657 aa10.8□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Trap1aP19473 224 aa10.8□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Aplp2Q06335 707 aa10.8□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Rps6ka4Q9Z2B9 773 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms