RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 MaddQ80U28 1577 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Q4VA45 678 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Gsdma3Q5Y4Y6 464 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Adgrl1Q80TR1 1466 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Kif13aQ9EQW7 1749 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Fkbp4P30416 458 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Q3UPC7 1272 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Ccdc171E9Q1U1 1324 aa9.86□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Sv2bQ8BG39 683 aa9.86□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Arhgef28P97433 1693 aa9.86□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Kcnh5Q920E3 988 aa9.86□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Chmp7Q8R1T1 451 aa9.85□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 KarsQ99MN1 595 aaKnown RBP9.85□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 DnmbpQ6TXD4 1580 aa9.85□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Ccdc155Q80VJ8 648 aa9.85□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Ankrd50F7BE84 1390 aa9.85□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Ccdc146E9Q9F7 977 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 FancaQ9JL70 1439 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Pik3r4Q8VD65 1358 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Vamp4O70480 141 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Eif2ak4Q9QZ05 1648 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 PtpruB1AUH1 1446 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Duxf3A0A0N4SV92 674 aa9.84□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Dip2aQ8BWT5 1523 aa9.83□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Wdr17E9Q271 1322 aa9.83□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Liat1Q810M6 228 aa9.83□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 TkfcQ8VC30 578 aa9.83□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Tns3Q5SSZ5 1440 aa9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Rab11fip3Q8CHD8 1047 aa9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Chmp4bQ9D8B3 224 aaKnown RBP9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Dip2bQ3UH60 1574 aa9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Mfap1aC0HKD8 439 aaKnown RBP9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Mfap1bC0HKD9 439 aaKnown RBP9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 PaskQ8CEE6 1383 aa9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Aifm3Q3TY86 605 aa9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Znf335A2A5K6 1337 aa9.82□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Nol11Q8BJW5 723 aaKnown RBP9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Aldh1l1Q8R0Y6 902 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Txnrd1Q9JMH6 613 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Speer4bQ9D9F7 267 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Ttc21aQ8C0S4 1314 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 KdrP35918 1367 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Chpf2Q3UU43 768 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Fam83gQ5SWY7 812 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Zpr1Q62384 459 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 GorabQ8BRM2 368 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Ak7Q9D2H2 614 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Itsn1Q9Z0R4 1714 aa9.81□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Map7O88735 730 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Btbd11Q6GQW0 1109 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 HnrnpuQ8VEK3 800 aaKnown RBP9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Rlbp1Q9Z275 317 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Abca14E9Q8F8 1683 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Nrxn1Q9CS84 1514 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Gm21680A0A0G2JGR8 267 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Map3k13Q1HKZ5 959 aa9.8□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Ubap1lG3UW59 384 aa9.79□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Slc4a10Q5DTL9 1118 aa9.79□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Smc5Q8CG46 1101 aaKnown RBP9.79□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Cfdp1O88271 295 aaKnown RBP9.79□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 OptnQ8K3K8 584 aa9.79□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Ipo8Q7TMY7 1010 aa9.78□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Kcna6Q61923 529 aa9.78□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 RictorQ6QI06 1708 aa9.78□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Exoc6bA6H5Z3 810 aa9.78□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Cnnm1Q0GA42 951 aa9.78□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Rtl5Q5DTT4 599 aa9.78□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Myom1Q62234 1667 aaKnown RBP9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Gm21663A0A0G2JE01 267 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Gm7361D3Z6R1 267 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 5031410I06RikE9Q4E0 267 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Gm1979E9QAN3 267 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Gm5862K7N5V5 267 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Gm10220K7N660 267 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 DaxxO35613 739 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Q8BT18 775 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 KnstrnQ9D9Z1 312 aaKnown RBP9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 MvpQ9EQK5 861 aa9.77□□□□□ -0.84
Ccdc39-201ENSMUST00000029222 Tubgcp6G5E8P0 1769 aa9.77□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Eif2s2Q99L45 331 aaKnown RBP9.77□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Gemin5Q8BX17 1502 aaKnown RBP9.77□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Eif4g2Q62448 906 aaKnown RBP9.77□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Smim5Q8BT42 78 aa9.77□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Mphosph10Q810V0 681 aaKnown RBP9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Gimap5Q8BWF2 308 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Sos1Q62245 1319 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 AU019823E9PUQ3 292 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 SkilQ60665 675 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Sart3Q9JLI8 962 aaKnown RBP9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 NktrP30415 1453 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Tmem2Q5FWI3 1383 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Nsd3Q6P2L6 1439 aa9.76□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Rreb1Q3UH06 1700 aaKnown RBP9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ccdc183A2AJB1 534 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Prkar2bP31324 416 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ccdc27Q3V036 639 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 CrklP47941 303 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ncoa4Q5U4H9 625 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ppm1gQ61074 542 aa9.75□□□□□ -0.85
Ccdc39-201ENSMUST00000029222 Ipo9Q91YE6 1041 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms