RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Als2Q920R0 1651 aa10.73□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Zfp142G5E869 1843 aa10.73□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Srpk2O54781 681 aaKnown RBP10.73□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Zscan21Q07231 555 aa10.73□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Ecm2Q5FW85 670 aa10.73□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Cbx1P83917 185 aaKnown RBP10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Kcna6Q61923 529 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Smc5Q8CG46 1101 aaKnown RBP10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Antxr1Q9CZ52 562 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Polr3aB2RXC6 1390 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Kdm2bQ6P1G2 1309 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Gm16486A0A1D5RMD1 1434 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Tmc1Q8R4P5 757 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 BbxQ8VBW5 907 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Slc5a4bQ91ZP4 660 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Usp32F8VPZ3 1604 aa10.72□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Pik3c2bE9QAN8 1632 aa10.71□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 PtmaP26350 111 aa10.71□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 NinlQ6ZQ12 1394 aa10.71□□□□□ -0.69
Lmx1a-201ENSMUST00000028003 Slit2Q9R1B9 1521 aa10.71□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Pdcl2Q78Y63 240 aa10.71□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Ccdc94Q9D6J3 314 aa10.71□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Cwc22Q8C5N3 908 aaKnown RBP10.7□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Atp7bQ64446 1462 aa10.7□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Q3UJC8 639 aa10.7□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Igsf3Q6ZQA6 1194 aa10.7□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Dcaf11Q91VU6 549 aa10.7□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Fam114a1Q9D281 569 aa10.7□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Puf60Q3UEB3 564 aaKnown RBP10.69□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Utp14aQ640M1 767 aaKnown RBP10.69□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 N4bp2F8VQG7 1678 aaKnown RBP10.69□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Rabep1O35551 862 aa10.69□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Abcc10Q8R4P9 1501 aa10.69□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Fam135bQ9DAI6 1403 aa10.68□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Nphp4P59240 1425 aa10.68□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Mknk2Q8CDB0 459 aa10.68□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Rpgrip1lQ8CG73 1264 aa10.68□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 IqubQ8CDK3 788 aa10.68□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Fez1Q8K0X8 392 aa10.68□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Ifit1bl1D3Z6F0 470 aa10.67□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Ybx3Q9JKB3 361 aaKnown RBP10.67□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Sipa1l2Q80TE4 1722 aa10.67□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Nhsl1Q8CAF4 1587 aa10.67□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Fbln2P37889 1221 aa10.67□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Gm20521D3Z5F7 333 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Tmem2Q5FWI3 1383 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 KarsQ99MN1 595 aaKnown RBP10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Kif24Q6NWW5 1356 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Qtrt2B8ZXI1 415 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Gm10563F6WIE4 79 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Q7TT23 1179 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Chmp4cQ9D7F7 232 aa10.66□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Podxl2Q8CAE9 603 aa10.65□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Cep170bQ80U49 1574 aa10.65□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Atp10bB1AWN4 1474 aa10.65□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Arid4aF8VPQ2 1261 aaKnown RBP10.65□□□□□ -0.7
Lmx1a-201ENSMUST00000028003 Mon2Q80TL7 1715 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Catsper2A2ARP9 588 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Rgl3Q3UYI5 709 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Fan1Q69ZT1 1020 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Gzf1Q4VBD9 706 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Plekhg5Q66T02 1073 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Abca14E9Q8F8 1683 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Cntnap1O54991 1385 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Zmym3Q9JLM4 1370 aa10.64□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 NcapgE9PWG6 1004 aa10.63□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Farp2Q91VS8 1065 aa10.63□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Nrxn1Q9CS84 1514 aa10.63□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Nectin2P32507 530 aa10.63□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Cnksr2Q80YA9 1032 aa10.63□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Mrvi1Q9WUX5 899 aaKnown RBP10.63□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Kcnj4P52189 445 aa10.62□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Nyap1Q6PFX7 833 aa10.62□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Mfap1aC0HKD8 439 aaKnown RBP10.62□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Mfap1bC0HKD9 439 aaKnown RBP10.62□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Rock2P70336 1388 aa10.62□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Samd1D3YXK1 519 aa10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Cald1E9QA15 768 aaKnown RBP10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Emilin2Q8K482 1074 aa10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Col22a1E9Q7P1 1613 aa10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Kdm2aP59997 1161 aa10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Rsph3aQ3UFY4 516 aa10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 CrbnQ8C7D2 445 aa10.61□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 FanciQ8K368 1330 aa10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Tnrc6bQ8BKI2 1810 aaKnown RBP10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Wdr78E9PYY5 807 aa10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Esx1O88933 382 aa10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Rfx1P48377 963 aa10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Cadps2Q8BYR5 1297 aa10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Stk26Q99JT2 416 aa10.6□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 NktrP30415 1453 aa10.59□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Gtpbp6Q3U6U5 514 aa10.59□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Tex14Q7M6U3 1450 aa10.59□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Terf2O35144 541 aa10.59□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Gtpbp4Q99ME9 634 aaKnown RBP10.59□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 RalgapbQ8BQZ4 1484 aa10.59□□□□□ -0.71
Lmx1a-201ENSMUST00000028003 Rundc1Q0VDN7 615 aa10.58□□□□□ -0.72
Lmx1a-201ENSMUST00000028003 Pank2Q3U4S0 443 aa10.58□□□□□ -0.72
Lmx1a-201ENSMUST00000028003 Znf526Q8BI66 675 aa10.58□□□□□ -0.72
Lmx1a-201ENSMUST00000028003 Usp40Q8BWR4 1235 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms