RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Ift57Q8BXG3 429 aa21.35■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Ccdc112A0AUP1 442 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Zscan20B2KFW1 1030 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Trim30cD3YVI9 513 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Lrrfip2Q91WK0 415 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Sirt1Q923E4 737 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Nphp1Q9QY53 687 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Clul1Q3ZRW6 464 aa21.34■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Abcf1Q6P542 837 aaKnown RBP21.33■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Brms1Q99N20 246 aa21.33■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Olfml1Q8BSH2 233 aa21.33■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Stxbp4Q9WV89 557 aa21.33■■□□□ 1.01
Sptbn4-201ENSMUST00000011895 Top2aQ01320 1528 aaKnown RBP21.33■■□□□ 1
Sptbn4-201ENSMUST00000011895 Ecm2Q5FW85 670 aa21.33■■□□□ 1
Sptbn4-201ENSMUST00000011895 Ctage5Q8R311 779 aa21.33■■□□□ 1
Sptbn4-201ENSMUST00000011895 Smc1aQ9CU62 1233 aaKnown RBP21.32■■□□□ 1
Sptbn4-201ENSMUST00000011895 Ncapg2Q6DFV1 1138 aa21.32■■□□□ 1
Sptbn4-201ENSMUST00000011895 Rnf187Q8BFX1 236 aa21.32■■□□□ 1
Sptbn4-201ENSMUST00000011895 Ccdc172Q810N9 267 aa21.32■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gnl2Q99LH1 728 aaKnown RBP21.32■■□□□ 1
Sptbn4-201ENSMUST00000011895 Naa15Q80UM3 865 aaKnown RBP21.31■■□□□ 1
Sptbn4-201ENSMUST00000011895 Tmx4Q8C0L0 335 aa21.31■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gm18336A0A140LIU8 765 aa21.31■■□□□ 1
Sptbn4-201ENSMUST00000011895 Stk3Q9JI10 497 aa21.31■■□□□ 1
Sptbn4-201ENSMUST00000011895 Prdm16A2A935 1275 aa21.31■■□□□ 1
Sptbn4-201ENSMUST00000011895 Smg7Q5RJH6 1138 aaKnown RBP21.31■■□□□ 1
Sptbn4-201ENSMUST00000011895 Nup88Q8CEC0 753 aaKnown RBP21.3■■□□□ 1
Sptbn4-201ENSMUST00000011895 Ankrd1Q9CR42 319 aa21.3■■□□□ 1
Sptbn4-201ENSMUST00000011895 Sptbn5F6UCX4 1208 aa21.3■■□□□ 1
Sptbn4-201ENSMUST00000011895 Znf710Q3U288 666 aa21.3■■□□□ 1
Sptbn4-201ENSMUST00000011895 BcanQ61361 883 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Smc1bQ920F6 1248 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Sept6Q9R1T4 434 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Trim34bJ3QNR8 485 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Sos1Q62245 1319 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gm1979E9QAN3 267 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Fez2Q6TYB5 348 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 ClasrpQ8CFC7 668 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gbp8Q2V6D6 525 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Tubb4bP68372 445 aaKnown RBP21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Mctp1E9PV86 951 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gsdma2Q32M21 443 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gimap6Q8K349 305 aa21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Luzp1Q8R4U7 1068 aaKnown RBP21.29■■□□□ 1
Sptbn4-201ENSMUST00000011895 Atf3Q60765 181 aa21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 Znf287Q9EQB9 759 aa21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 Ppfibp2O35711 882 aa21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 LrpprcQ6PB66 1392 aaKnown RBP21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 Myom3A2ABU4 1439 aa21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 Nol12Q8BG17 217 aa21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 ImmtQ8CAQ8 757 aaKnown RBP21.28■■□□□ 1
Sptbn4-201ENSMUST00000011895 Soga1E1U8D0 1418 aa21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Fsd1Q7TPM6 496 aa21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Rbm10Q99KG3 930 aaKnown RBP21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Trim11Q99PQ2 467 aa21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Gm21671G3UY31 267 aa21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Rpgrip1lQ8CG73 1264 aa21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Homer1Q9Z2Y3 366 aa21.27■■□□□ 1
Sptbn4-201ENSMUST00000011895 Fbf1A2A870 1173 aa21.27■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Ddx23D3Z0M9 819 aaKnown RBP21.27■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 TatQ8QZR1 454 aa21.27■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 4921530L21RikQ9CQ47 274 aa21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Abl1P00520 1123 aa21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Maats1Q8BRC6 783 aa21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Fsd2Q8BZ52 692 aa21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 IkQ9Z1M8 557 aaKnown RBP21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Eif3j1Q3UGC7 261 aaKnown RBP21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Jakmip3Q5DTN8 844 aa21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Eif3j2Q66JS6 263 aa21.26■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Smco2Q9DA21 347 aa21.25■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Cetn1P41209 172 aa21.25■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Fchsd2Q3USJ8 740 aa21.25■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 4921504E06RikQ8CET2 560 aa21.25■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Ddx19aQ61655 478 aaKnown RBP21.25■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 TimelessQ9R1X4 1197 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Tsg101Q61187 391 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Iqgap2Q3UQ44 1575 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Gm42641I6L9G2 585 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 PrkcshO08795 521 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Jade2Q6ZQF7 829 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 AtripQ8BMG1 785 aa21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Atad2bE9Q166 1460 aaKnown RBP21.24■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Paxbp1P58501 919 aa21.23■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Ssr1Q9CY50 286 aaKnown RBP21.23■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Ehbp1Q69ZW3 1231 aa21.23■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Calml4Q91WQ9 153 aa21.23■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 ImpactO55091 318 aa21.23■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Kif18aQ91WD7 886 aa21.23■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Shtn1Q8K2Q9 631 aa21.22■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Bbof1Q3V079 533 aa21.22■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Knop1Q9Z2Q2 478 aaKnown RBP21.22■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Gbp1Q01514 589 aa21.22■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 AcrbpQ3V140 540 aa21.22■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Sept11Q8C1B7 431 aaKnown RBP21.21■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Shroom4Q1W617 1475 aa21.21■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Srgap3Q812A2 1099 aa21.21■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Jakmip1Q8BVL9 626 aa21.21■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Asxl1P59598 1514 aa21.21■□□□□ 0.99
Sptbn4-201ENSMUST00000011895 Bms1Q6PGF5 1284 aaKnown RBP21.2■□□□□ 0.98
Sptbn4-201ENSMUST00000011895 Cct4P80315 539 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms