RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Cfap45Q9D9U9 551 aa14.34□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Sept6Q9R1T4 434 aa14.34□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ccdc112A0AUP1 442 aa14.33□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 TxlnaQ6PAM1 554 aaKnown RBP14.33□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Erlin1Q91X78 346 aa14.33□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ccdc171E9Q1U1 1324 aa14.33□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Zkscan7E9PVW1 718 aa14.33□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Gm21671G3UY31 267 aa14.33□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ppfibp2O35711 882 aa14.33□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 MyclP10166 368 aa14.33□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Stim1P70302 685 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Liat1Q810M6 228 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Bag4Q8CI61 457 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Tubb6Q922F4 447 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 CebpzP53569 1052 aaKnown RBP14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Psme1P97371 249 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Gas2l3Q3UWW6 683 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Zfp91Q62511 572 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Nphp1Q9QY53 687 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Sytl4Q9R0Q1 673 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Tmx1Q8VBT0 278 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Rasa1E9PYG6 1038 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Iqca1Q9CUL5 857 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Odf2lQ9D478 642 aa14.32□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Tspyl2Q7TQI8 677 aa14.31□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Kif3bQ61771 747 aa14.31□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ncapg2Q6DFV1 1138 aa14.31□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 NacadQ5SWP3 1504 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Terf2O35144 541 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Dync1i1O88485 628 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Smc1aQ9CU62 1233 aaKnown RBP14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Apaf1O88879 1249 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ppp2r1aQ76MZ3 589 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Plekhh2Q8C115 1491 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Smc5Q8CG46 1101 aaKnown RBP14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ssr1Q9CY50 286 aaKnown RBP14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Gm7361D3Z6R1 267 aa14.3□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Abl1P00520 1123 aa14.29□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Fsd1Q7TPM6 496 aa14.29□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Akap8Q9DBR0 687 aaKnown RBP14.29□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Baz1aO88379 1555 aa14.29□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Pof1bQ8K4L4 587 aa14.29□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 CarsQ9ER72 831 aaKnown RBP14.29□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Zfp251Q6PCX8 632 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Gng11P61953 73 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Tmx4Q8C0L0 335 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Txndc2Q6P902 515 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Armc9Q9D2I5 817 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Abcf1Q6P542 837 aaKnown RBP14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Fam177a1Q8BR63 207 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ccdc186Q8C9S4 917 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ccdc158Q8CDI6 1109 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Luzp1Q8R4U7 1068 aaKnown RBP14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ppp4r3bQ922R5 820 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Adck5Q80V03 582 aa14.28□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 UacaQ8CGB3 1411 aa14.27□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Mphosph10Q810V0 681 aaKnown RBP14.27□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Gnai2P08752 355 aaKnown RBP14.27□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ddx58Q6Q899 926 aa14.27□□□□□ -0.12
Pcdhac1-201ENSMUST00000007584 Ktn1Q61595 1327 aaKnown RBP14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Rab11fip3Q8CHD8 1047 aa14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Bcl11bQ99PV8 884 aa14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ccnb3Q810T2 1396 aa14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Grpel1Q99LP6 217 aa14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Cdc45Q9Z1X9 566 aa14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Homer1Q9Z2Y3 366 aa14.27□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Paip2Q9D6V8 124 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ca8P28651 291 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Agtpbp1Q641K1 1218 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Znf131Q8K3J5 619 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Ccdc12Q8R344 166 aaKnown RBP14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Top1mtQ8R4U6 593 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Rnf34Q99KR6 376 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Erc1Q99MI1 1120 aa14.26□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Lrrcc1Q69ZB0 1026 aa14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Kdm5dQ62240 1548 aa14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Plekhd1B2RPU2 505 aa14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Nol8Q3UHX0 1147 aaKnown RBP14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Kdm4aQ8BW72 1064 aa14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Naa25Q8BWZ3 972 aa14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Mink1Q9JM52 1308 aa14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Synpo2Q91YE8 1087 aaKnown RBP14.25□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Gm1979E9QAN3 267 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Bcl2l13P59017 434 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Fbf1A2A870 1173 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Gigyf1Q99MR1 1044 aaKnown RBP14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Stxbp4Q9WV89 557 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Rad54l2Q99NG0 1466 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Clul1Q3ZRW6 464 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 SarnpQ9D1J3 210 aaKnown RBP14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 HypkQ9CR41 129 aa14.24□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Tex13c2A0A0G2JGA3 530 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Gm45140A0A0N4SUM8 220 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Lekr1B2RVN1 116 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Vps41Q5KU39 853 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Tmc2Q8R4P4 888 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 SltmQ8CH25 1031 aaKnown RBP14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Chd1lQ9CXF7 900 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Cwc27Q3TKY6 469 aa14.23□□□□□ -0.13
Pcdhac1-201ENSMUST00000007584 Iffo1Q8BXL9 562 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms