RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Ltbp4Q8K4G1 1666 aa9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Abcc10Q8R4P9 1501 aa9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Lmtk3Q5XJV6 1424 aa9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 C3P01027 1663 aa9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Iqsec2Q5DU25 1478 aa9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Ncoa4Q5U4H9 625 aa9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Nol11Q8BJW5 723 aaKnown RBP9.66□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 TnikP83510 1323 aa9.65□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Col14a1Q80X19 1797 aa9.65□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Eya1P97767 591 aa9.65□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Trim28Q62318 834 aa9.65□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 Fam50bQ9WTJ8 334 aa9.65□□□□□ -0.86
Crnkl1-201ENSMUST00000001818 FancaQ9JL70 1439 aa9.65□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Cadps2Q8BYR5 1297 aa9.65□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 TkfcQ8VC30 578 aa9.64□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 ZgpatQ8VDM1 511 aa9.64□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Usp32F8VPZ3 1604 aa9.64□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ubap1lG3UW59 384 aa9.64□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Kiaa1107Q80TK0 1369 aa9.64□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 TmpoQ61033 693 aaKnown RBP9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Zpr1Q62384 459 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Tex14Q7M6U3 1450 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Cavin4A2AMM0 362 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Trim30dE9PWL0 497 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 ChgaP26339 463 aaKnown RBP9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Tnnt1O88346 262 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Sf3b2Q3UJB0 878 aaKnown RBP9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 HypkQ9CR41 129 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Swt1Q9DBQ9 907 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Arap3Q8R5G7 1538 aa9.63□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Uhrf1bp1lA2RSJ4 1457 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Nrxn1Q9CS84 1514 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 OptnQ8K3K8 584 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ncapd2Q8K2Z4 1392 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Uspl1Q3ULM6 1089 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ralbp1Q62172 648 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Chmp5Q9D7S9 219 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ppp1r3fQ9JIG4 799 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Atf7ipQ7TT18 1306 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Phlpp1Q8CHE4 1687 aa9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Kif20bQ80WE4 1774 aaKnown RBP9.62□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Map4k4P97820 1233 aaKnown RBP9.61□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Fchsd2Q3USJ8 740 aa9.61□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Liat1Q810M6 228 aa9.61□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Eno4Q8C042 619 aa9.61□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ccdc60Q8C4J0 545 aa9.61□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Card10P58660 1021 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Gsdma3Q5Y4Y6 464 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Snap23O09044 210 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 CrklP47941 303 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Aplp1Q03157 653 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ggnbp2Q5SV77 696 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Arhgef1Q61210 920 aaKnown RBP9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Cc2d1aQ8K1A6 943 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Dmrt2Q8BG36 561 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Psrc1Q9D0P7 329 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ybx3Q9JKB3 361 aaKnown RBP9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Tnrc6bQ8BKI2 1810 aaKnown RBP9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 KdrP35918 1367 aa9.6□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Ano8Q6PB70 1060 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Klhdc4Q921I2 584 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Cdk12Q14AX6 1484 aaKnown RBP9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Kank1E9Q238 1360 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 CemipQ8BI06 1361 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Sipa1l2Q80TE4 1722 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Gm21680A0A0G2JGR8 267 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 Speer4bQ9D9F7 267 aa9.59□□□□□ -0.87
Crnkl1-201ENSMUST00000001818 NalcnQ8BXR5 1738 aa9.58□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Cdhr2E9Q7P9 1308 aa9.58□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Usp16Q99LG0 825 aa9.58□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Usp19Q3UJD6 1360 aa9.58□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 NudcO35685 332 aaKnown RBP9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Q3TQI7 289 aaKnown RBP9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Nyap1Q6PFX7 833 aa9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 RgmbQ7TQ33 436 aa9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Chmp7Q8R1T1 451 aa9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Chd4Q6PDQ2 1915 aaKnown RBP9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Rbm25B2RY56 838 aaKnown RBP9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Thsd7aQ69ZU6 1645 aa9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Plekhh1Q80TI1 1356 aa9.57□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Plekhd1B2RPU2 505 aa9.56□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Lrrc59Q922Q8 307 aaKnown RBP9.56□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Bcl2l12Q9D3J3 255 aa9.56□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Rab11fip3Q8CHD8 1047 aa9.56□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gli3Q61602 1583 aa9.56□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 D430041D05RikF6ZGR6 1678 aa9.56□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Ciz1Q8VEH2 845 aa9.55□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 TnrQ8BYI9 1358 aa9.55□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Tubgcp6G5E8P0 1769 aa9.55□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Ccar1Q8CH18 1146 aaKnown RBP9.55□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 C5P06684 1680 aa9.55□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Prim1P20664 417 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Q4VA45 678 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Ccdc155Q80VJ8 648 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 ThemisQ8BGW0 636 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Znf526Q8BI66 675 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Prkrip1Q9CWV6 186 aaKnown RBP9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Bcl11aQ9QYE3 773 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Zeb2Q9R0G7 1215 aa9.54□□□□□ -0.88
Crnkl1-201ENSMUST00000001818 Gnai1B2RSH2 354 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms