RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 TBC1D3Q8IZP1 549 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 DEFB119Q8N690 84 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 CCDC110Q8TBZ0 833 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 SNX19Q92543 992 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 FAM131CQ96AQ9 280 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 VOPP1Q96AW1 172 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 IMP4Q96G21 291 aaKnown RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 SPATA13Q96N96 652 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 RBM15Q96T37 977 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 PCED1AQ9H1Q7 454 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 DUSP15Q9H1R2 295 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-217ENST00000569263 GBA3Q9H227 469 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 PCDHB9Q9Y5E1 797 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 MUC6Q6W4X9 2439 aa13.17□□□□□ -0.3
CNOT1-217ENST00000569263 C5orf60A6NFR6 353 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 TRAFD1O14545 582 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 HTRA2O43464 458 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 OPHN1O60890 802 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 FSBPO95073 299 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 PGLSO95336 258 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 IFNB1P01574 187 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ITGAVP06756 1048 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 MMP2P08253 660 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 STIP1P31948 543 aaKnown RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 CD68P34810 354 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ACTN2P35609 894 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 EPHB1P54762 984 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 SKOR1P84550 965 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 PRPSAP1Q14558 356 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 OASLQ15646 514 aaKnown RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 SLC14A2Q15849 920 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 PCSK7Q16549 785 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 UGP2Q16851 508 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 SPDYCQ5MJ68 293 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 SYCP2LQ5T4T6 812 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ERAP2Q6P179 960 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 CCDC89Q8N998 374 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 CADM4Q8NFZ8 388 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ECHDC3Q96DC8 303 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 IFT43Q96FT9 208 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ZC3H10Q96K80 434 aaKnown RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 NSMCE3Q96MG7 304 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 PPP1R2P1Q96PQ5 205 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 C6orf106Q9H6K1 298 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-217ENST00000569263 USP29Q9HBJ7 922 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
CNOT1-217ENST00000569263 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PLXNA2O75051 1894 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 GOLGA6CA6NDK9 693 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 GOLGA6BA6NDN3 693 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 KIF2AO00139 706 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-217ENST00000569263 FANCGO15287 622 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 TSPAN6O43657 245 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 AP1G1O43747 822 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 RNGTTO60942 597 aaKnown RBP13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PMPCBO75439 489 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 MT-CYBP00156 380 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-217ENST00000569263 GOLGA6DP0CG33 693 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 TIMP2P16035 220 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PSMB4P28070 264 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 GDF10P55107 478 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 TAS2R38P59533 333 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 FAM193AP78312 1265 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 NHLH1Q02575 133 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 P3H1Q32P28 736 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 WDR45BQ5MNZ6 344 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 LYSMD4Q5XG99 296 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PRPF39Q86UA1 669 aaKnown RBP13.15□□□□□ -0.3
CNOT1-217ENST00000569263 ZSWIM9Q86XI8 627 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 SLC41A1Q8IVJ1 513 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 RGL4Q8IZJ4 473 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PRELID2Q8N945 189 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 SPATA22Q8NHS9 363 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
CNOT1-217ENST00000569263 LRRC45Q96CN5 670 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 FCRL5Q96RD9 977 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 PCDH12Q9NPG4 1184 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 GOLGA6AQ9NYA3 693 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 UBP1Q9NZI7 540 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 FAM153AQ9UHL3 310 aa13.15□□□□□ -0.3
CNOT1-217ENST00000569263 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms