RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TMEM270Q6UE05 265 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 MACC1Q6ZN28 852 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 TMEM110Q86TL2 294 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 PCDH19Q8TAB3 1148 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 LMO3Q8TAP4 145 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 STK32AQ8WU08 396 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 PMEPA1Q969W9 287 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 SLC35C1Q96A29 364 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 FAM149B1Q96BN6 582 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 INTS4Q96HW7 963 aaKnown RBP9.24□□□□□ -0.93
PRKCH-218ENST00000555628 TMEM74Q96NL1 305 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 GFM1Q96RP9 751 aaKnown RBP9.24□□□□□ -0.93
PRKCH-218ENST00000555628 STRADBQ9C0K7 418 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 TNKS2Q9H2K2 1166 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKCH-218ENST00000555628 IL36AQ9UHA7 158 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 APPL1Q9UKG1 709 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 HPSEQ9Y251 543 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 ITM2BQ9Y287 266 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 HS3ST4Q9Y661 456 aa9.24□□□□□ -0.93
PRKCH-218ENST00000555628 ARHGEF17Q96PE2 2063 aaPredicted RBP9.24□□□□□ -0.93
PRKCH-218ENST00000555628 A0A0D9SEW6 157 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 FPGTO14772 594 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 CLDN11O75508 207 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 RNF224P0DH78 156 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 TBXAS1P24557 533 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 CCR10P46092 362 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 PSMA6P60900 246 aaKnown RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 YWHAEP62258 255 aaKnown RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 CCDC15Q0P6D6 951 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 STILQ15468 1287 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 DENND1BQ6P3S1 775 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 LVRNQ6Q4G3 990 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 LINGO4Q6UY18 593 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 SPRED1Q7Z699 444 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 ATP6V0D2Q8N8Y2 350 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 TP53I13Q8NBR0 393 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 GPR156Q8NFN8 814 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 USP7Q93009 1102 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 NKD1Q969G9 470 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 TMEM159Q96B96 161 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 FEM1CQ96JP0 617 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 RPRD1AQ96P16 312 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 CPEB1Q9BZB8 566 aaKnown RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 LRRN3Q9H3W5 708 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 POPDC2Q9HBU9 364 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 SEPT10Q9P0V9 454 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 PLEKHB1Q9UF11 243 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-218ENST00000555628 VANGL2Q9ULK5 521 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 CNTN6Q9UQ52 1028 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 APCP25054 2843 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 POLQO75417 2590 aa9.23□□□□□ -0.93
PRKCH-218ENST00000555628 MED13Q9UHV7 2174 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 SHANK1Q9Y566 2161 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 NF1P21359 2839 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 IGLV3-10A0A075B6K4 115 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 FAM237AA0A1B0GTK4 181 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 E5RJQ4 531 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 PMM2O15305 246 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 TSPAN6O43657 245 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 STX10O60499 249 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 ANXA6P08133 673 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 JMJD7P0C870 316 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 BMP4P12644 408 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CD33P20138 364 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 RPL13P26373 211 aaKnown RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CCR1P32246 355 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 SERPINH1P50454 418 aaKnown RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 HK3P52790 923 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CDH4P55283 916 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 YPEL5P62699 121 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 YWHAZP63104 245 aaKnown RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 C16orf72Q14CZ0 275 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 ALG11Q2TAA5 492 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CERCAMQ5T4B2 595 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 ESRP1Q6NXG1 681 aaKnown RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 FIGNL1Q6PIW4 674 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CCNJLQ8IV13 435 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 SFTPA2Q8IWL1 248 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CEP57L1Q8IYX8 460 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 FSTL5Q8N475 847 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 PPP1R16AQ96I34 528 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CCDC114Q96M63 670 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 ZNF396Q96N95 335 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 C2orf49Q9BVC5 232 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 TRIM62Q9BVG3 475 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 PHACTR1Q9C0D0 580 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 CEP44Q9C0F1 390 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 DYRK4Q9NR20 520 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 MBNL1Q9NR56 388 aaKnown RBP9.22□□□□□ -0.93
PRKCH-218ENST00000555628 DDIT4Q9NX09 232 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 PAXBP1Q9Y5B6 917 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 PCDHGA3Q9Y5H0 932 aa9.22□□□□□ -0.93
PRKCH-218ENST00000555628 ZNF106Q9H2Y7 1883 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms