RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TUBB3Q13509 450 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 LRP8Q14114 963 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TRMT5Q32P41 509 aaKnown RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SCUBE3Q8IX30 993 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SLC39A8Q9C0K1 460 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ISCUQ9H1K1 167 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 MOCS1Q9NZB8 636 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TMCO1Q9UM00 188 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CROCC2H7BZ55 1655 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 AKAP8O43823 692 aaKnown RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CNTFP26441 200 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 IKBKEQ14164 716 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 HKDC1Q2TB90 917 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PTPN20Q4JDL3 420 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SPANXN3Q5MJ09 141 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 XRRA1Q6P2D8 792 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CCNJLQ8IV13 435 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 DHRSXQ8N5I4 330 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TBC1D30Q9Y2I9 924 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 HAT1O14929 419 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 RCAN1P53805 252 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CYP4F8P98187 520 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PLGLB1Q02325 96 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 KCNA10Q16322 511 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 IRGCQ6NXR0 463 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 POC5Q8NA72 575 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 AP3S1Q92572 193 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SERPINB11Q96P15 392 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 NDNQ99608 321 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SAMHD1Q9Y3Z3 626 aaKnown RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TRIM38O00635 465 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CCNDBP1O95273 360 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 NDST1P52848 882 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF613Q6PF04 617 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ADSSL1Q8N142 457 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CPT1CQ8TCG5 803 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TRAPPC12Q8WVT3 735 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PLEKHG4BQ96PX9 1271 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 NFASCO94856 1347 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 A0A1B0GTH6 734 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TULP3O75386 442 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CDH17Q12864 832 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 MAPK7Q13164 816 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 RIPK1Q13546 671 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CCNI2Q6ZMN8 369 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PTCHD4Q6ZW05 846 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PYDC1Q8WXC3 89 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 OVCA2Q8WZ82 227 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 BICRAQ9NZM4 1560 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 E2F3O00716 465 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SIN3BO75182 1162 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 USP12O75317 370 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SERPINE1P05121 402 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PON1P27169 355 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CREMQ03060 361 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 MPP2Q14168 576 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 COLEC12Q5KU26 742 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 FRRS1Q6ZNA5 592 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ZDHHC13Q8IUH4 622 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 OXNAD1Q96HP4 312 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SLC27A5Q9Y2P5 690 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ARHGAP31Q2M1Z3 1444 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CCDC88CQ9P219 2028 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 URADA6NGE7 173 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 RHPN2P1A8MT19 583 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 GCATO75600 419 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CFIP05156 583 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TKTP29401 623 aaKnown RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 USP46P62068 366 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TXNL4AP83876 142 aaKnown RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 VLDLRP98155 873 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PPP3CAQ08209 521 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 IL18R1Q13478 541 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 MEA1Q16626 185 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ZCCHC12Q6PEW1 402 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CDYL2Q8N8U2 506 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CORO2BQ9UQ03 480 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TLL1O43897 1013 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 IL12AP29459 219 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ELK3P41970 407 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 RGS8P57771 180 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 VPS72Q15906 364 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 STK40Q8N2I9 435 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 DPF2Q92785 391 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PRICKLE1Q96MT3 831 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF607Q96SK3 696 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ARHGAP9Q9BRR9 750 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 BATF3Q9NR55 127 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 ST3GAL5Q9UNP4 418 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SERPINB7O75635 380 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 ANPEPP15144 967 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 BMP7P18075 431 aa6.91□□□□□ -1.3
SYNE2-216ENST00000555002 GMFBP60983 142 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms