RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PFKPQ01813 784 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 CDH17Q12864 832 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-228ENST00000548938 ADI1Q9BV57 179 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 KIFC1Q9BW19 673 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 MUC3BQ9H195 1237 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 UPF3AQ9H1J1 476 aaKnown RBP13.83□□□□□ -0.2
HDAC7-228ENST00000548938 HIPK3Q9H422 1215 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 AURKCQ9UQB9 309 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 A0A1W2PPW3 197 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 H3BMQ9 156 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 NRP2O60462 931 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 YWHAQP27348 245 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 GRM5P41594 1212 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 PLK1P53350 603 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 KCTD2Q14681 263 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 POU6F1Q14863 301 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 BNIPLQ7Z465 357 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 NT5C3BQ969T7 300 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 ELMO2Q96JJ3 720 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 COG8Q96MW5 612 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 NPLQ9BXD5 320 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-228ENST00000548938 PAIP1Q9H074 479 aaKnown RBP13.83□□□□□ -0.2
HDAC7-228ENST00000548938 RPF2Q9H7B2 306 aaKnown RBP13.83□□□□□ -0.2
HDAC7-228ENST00000548938 MEAF6Q9HAF1 191 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 CXorf21Q9HAI6 301 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 TUBA8Q9NY65 449 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-228ENST00000548938 CDH7Q9ULB5 785 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 SHROOM3Q8TF72 1996 aa13.83□□□□□ -0.2
HDAC7-228ENST00000548938 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 GIPC1O14908 333 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 JCHAINP01591 159 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 CD247P20963 164 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 MYF6P23409 242 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ATP5F1P24539 256 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 TBCELQ5QJ74 424 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 C8orf82Q6P1X6 216 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 TNIP2Q8NFZ5 429 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 WNT8BQ93098 351 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 LRCH3Q96II8 777 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 MRPL57Q9BQC6 102 aaKnown RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 SLC25A23Q9BV35 468 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 FBRSL1Q9HCM7 1045 aaKnown RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 TBC1D23Q9NUY8 699 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 SLC38A7Q9NVC3 462 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ARMC1Q9NVT9 282 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 SNX10Q9Y5X0 201 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ATP6AP2A0A1C7CYW4 349 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF701M0R085 212 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 CLDN5O00501 218 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 GPC4O75487 556 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ATP6AP2O75787 350 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 BEST1O76090 585 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 STAMBPO95630 424 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 HMOX2P30519 316 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ADRA1BP35368 520 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 SLC1A2P43004 574 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 NME5P56597 212 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 MTA1Q13330 715 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 PMS2P3Q13401 168 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 GJC2Q5T442 439 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 GPR107Q5VW38 600 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 FAM45BPQ6NSW5 357 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 XKR5Q6UX68 686 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 PDZD4Q76G19 769 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 CUZD1Q86UP6 607 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 RNF168Q8IYW5 571 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 CRYBG2Q8N1P7 616 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 MFSD2AQ8NA29 543 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 SPATA22Q8NHS9 363 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 FAM45AQ8TCE6 357 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 THAP11Q96EK4 314 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 FBXL20Q96IG2 436 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 MS4A4AQ96JQ5 239 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 NAA50Q9GZZ1 169 aaKnown RBP13.82□□□□□ -0.2
HDAC7-228ENST00000548938 IL1RL2Q9HB29 575 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 CDHR5Q9HBB8 845 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 DOLKQ9UPQ8 538 aa13.82□□□□□ -0.2
HDAC7-228ENST00000548938 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 NUP205Q92621 2012 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 KANSL1LA0AUZ9 987 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 SPTLC1O15269 473 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 ARNTP27540 789 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 RABGGTBP53611 331 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 MERTKQ12866 999 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 CSHL1Q14406 222 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 UGP2Q16851 508 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 MAP7D1Q3KQU3 841 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 FGD3Q5JSP0 725 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms