RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 LTB4R2Q9NPC1 389 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 AURKAIP1Q9NWT8 199 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-203ENST00000537024 IRAK4Q9NWZ3 460 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 HMG20BQ9P0W2 317 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 KCND3Q9UK17 655 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 BAG5Q9UL15 447 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 MTF2Q9Y483 593 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-203ENST00000537024 TCAF1Q9Y4C2 921 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 URB1O60287 2271 aaKnown RBP4.31□□□□□ -1.72
SNHG1-203ENST00000537024 SDK1Q7Z5N4 2213 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 KIAA1217Q5T5P2 1943 aa4.31□□□□□ -1.72
SNHG1-203ENST00000537024 KIF26AQ9ULI4 1882 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 A1L4Q6 167 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ZAR1LA6NP61 321 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 HAS3O00219 553 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 SLC16A3O15427 465 aaKnown RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 PRICKLE3O43900 615 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 FAM20BO75063 409 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 CBFA2T3O75081 653 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 EPN2O95208 641 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 VNN1O95497 513 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ATP1A3P13637 1013 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 HOXA5P20719 270 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ACRV1P26436 265 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 RPS9P46781 194 aaKnown RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 CCR5P51681 352 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 DGKQP52824 942 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 OAZ1P54368 228 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 RNASELQ05823 741 aaKnown RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 MTAPQ13126 283 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 SRSF5Q13243 272 aaKnown RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 TOB2Q14106 344 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ICAM4Q14773 271 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 MLF2Q15773 248 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 BEAN1Q3B7T3 259 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 TBRG1Q3YBR2 411 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 GALNTL6Q49A17 601 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 CTXN3Q4LDR2 81 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 COLEC12Q5KU26 742 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 TEDDM1Q5T9Z0 273 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 DGAT2L7PQ6IED9 249 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 NAA16Q6N069 864 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 C1orf122Q6ZSJ8 110 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 PIK3AP1Q6ZUJ8 805 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 GPR149Q86SP6 731 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 P3H2Q8IVL5 708 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 SLC22A17Q8WUG5 538 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 GLG1Q92896 1179 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 REXO5Q96IC2 774 aaKnown RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 VPS50Q96JG6 964 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 MYADMQ96S97 322 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 EDEM2Q9BV94 578 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 DPCDQ9BVM2 203 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-203ENST00000537024 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 GPR63Q9BZJ6 419 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 XYLT2Q9H1B5 865 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ARRDC1-AS1Q9H2J1 176 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 SLC38A10Q9HBR0 1119 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 TRIM36Q9NQ86 728 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ENTPD7Q9NQZ7 604 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 TMLHEQ9NVH6 421 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 TMEM160Q9NX00 188 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 EPS15L1Q9UBC2 864 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ARHGAP26Q9UNA1 814 aa4.3□□□□□ -1.72
SNHG1-203ENST00000537024 ASCC3Q8N3C0 2202 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 ATMQ13315 3056 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PCNX2A6NKB5 2137 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 B4E171 279 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 CTIFO43310 598 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 TSPAN3O60637 253 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 ZBED4O75132 1171 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 CIAO1O76071 339 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 ITGB3P05106 788 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 HSP90AA1P07900 732 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 CNPP09543 421 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 GP1BBP13224 206 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 AKR1B1P15121 316 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 LAG3P18627 525 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 HOXC8P31273 242 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 LIPAP38571 399 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 TSPAN7P41732 249 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 RXRGP48443 463 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 SELENOPP49908 381 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 NXPH1P58417 271 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 DYNLL1P63167 89 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 CFHR1Q03591 330 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 SEMA3BQ13214 749 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PDCLQ13371 301 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 PRKD1Q15139 912 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 TBCCQ15814 346 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 L1TD1Q5T7N2 865 aaKnown RBP4.29□□□□□ -1.72
SNHG1-203ENST00000537024 DAB2IPQ5VWQ8 1189 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 ATG16L1Q676U5 607 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 CCDC144NLQ6NUI1 221 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 DSTYKQ6XUX3 929 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 SYNE3Q6ZMZ3 975 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 BBS12Q6ZW61 710 aa4.29□□□□□ -1.72
SNHG1-203ENST00000537024 TMPRSS6Q8IU80 811 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms