RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CPT1BQ92523 772 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 OXNAD1Q96HP4 312 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 TDRD1Q9BXT4 1180 aaKnown RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 FOXQ1Q9C009 403 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 TRABDQ9H4I3 376 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 ZDHHC6Q9H6R6 413 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 CD248Q9HCU0 757 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 HACD3Q9P035 362 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 ANAPC5Q9UJX4 755 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 MTF2Q9Y483 593 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 TECTAO75443 2155 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 MAGEB16A2A368 324 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 ANKRD66B4E2M5 251 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 PPFIA2O75334 1257 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 LEFTY1O75610 366 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 GRIA4P48058 902 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 NPY2RP49146 381 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 NUBP1P53384 320 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 SATB1Q01826 763 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 CDH17Q12864 832 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 TTC31Q49AM3 519 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-205ENST00000535927 ARSIQ5FYB1 569 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 IZUMO3Q5VZ72 239 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 HIBCHQ6NVY1 386 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-205ENST00000535927 LRRC8BQ6P9F7 803 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 GPR161Q8N6U8 529 aaKnown RBP16.37■□□□□ 0.21
VAMP1-205ENST00000535927 PDCD7Q8N8D1 485 aaKnown RBP16.37■□□□□ 0.21
VAMP1-205ENST00000535927 NAT8LQ8N9F0 302 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 SPATA22Q8NHS9 363 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-205ENST00000535927 EXOC2Q96KP1 924 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 MRGPRX2Q96LB1 330 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 TBL1YQ9BQ87 522 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 TRIM51Q9BSJ1 452 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 MLPHQ9BV36 600 aaPredicted RBP16.37■□□□□ 0.21
VAMP1-205ENST00000535927 EPB41L5Q9HCM4 733 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 GDF3Q9NR23 364 aa16.37■□□□□ 0.21
VAMP1-205ENST00000535927 CCDC163A0A0D9SF12 145 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 EIF3HO15372 352 aaKnown RBP eCLIP16.36■□□□□ 0.21
VAMP1-205ENST00000535927 BNIP3LO60238 219 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 PMPCBO75439 489 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 MT-CYBP00156 380 aaPredicted RBP16.36■□□□□ 0.21
VAMP1-205ENST00000535927 DNTTP04053 509 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 RPL21P46778 160 aaKnown RBP16.36■□□□□ 0.21
VAMP1-205ENST00000535927 CXCL12P48061 93 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 VPS41P49754 854 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 NUMBP49757 651 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 NRLP54845 237 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 PDE1BQ01064 536 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 GUCY2DQ02846 1103 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 ELP6Q0PNE2 266 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 SLC1A5Q15758 541 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 CST6Q15828 149 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 TEX35Q5T0J7 233 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 TMPRSS6Q8IU80 811 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 CAMK1DQ8IU85 385 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 CCNJLQ8IV13 435 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 PDIK1LQ8N165 341 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 CHST14Q8NCH0 376 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 FLCNQ8NFG4 579 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 PTCD2Q8WV60 388 aaKnown RBP16.36■□□□□ 0.21
VAMP1-205ENST00000535927 ART4Q93070 314 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 LRRC39Q96DD0 335 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 SIPA1Q96FS4 1042 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 TRIB3Q96RU7 358 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 LYSMD1Q96S90 227 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 KDM4CQ9H3R0 1056 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 MAGEE1Q9HCI5 957 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 KCTD5Q9NXV2 234 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 BFARQ9NZS9 450 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 MTRF1LQ9UGC7 380 aaKnown RBP16.36■□□□□ 0.21
VAMP1-205ENST00000535927 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 DMGDHQ9UI17 866 aaKnown RBP16.36■□□□□ 0.21
VAMP1-205ENST00000535927 FZD4Q9ULV1 537 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 NCKAP1Q9Y2A7 1128 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 SNX24Q9Y343 169 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 PCDHGC4Q9Y5F7 938 aa16.36■□□□□ 0.21
VAMP1-205ENST00000535927 ZNF217O75362 1048 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 IL1BP01584 269 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 UGT2B4P06133 528 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 CYP2A6P11509 494 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-205ENST00000535927 OXTRP30559 389 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 SLC8A1P32418 973 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 COPAP53621 1224 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 ITGA8P53708 1063 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 EPHB1P54762 984 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 RPS14P62263 151 aaKnown RBP16.35■□□□□ 0.21
VAMP1-205ENST00000535927 TRAF2Q12933 501 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 UGP2Q16851 508 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 NLRP9Q7RTR0 991 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 MMAAQ8IVH4 418 aaKnown RBP16.35■□□□□ 0.21
VAMP1-205ENST00000535927 PAF1Q8N7H5 531 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 IPMKQ8NFU5 416 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 PIH1D2Q8WWB5 315 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 PEX13Q92968 403 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 FAM131CQ96AQ9 280 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 SCRN2Q96FV2 425 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 KLHL32Q96NJ5 620 aa16.35■□□□□ 0.21
VAMP1-205ENST00000535927 GORASP1Q9BQQ3 440 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms