RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TDRD1Q9BXT4 1180 aaKnown RBP15.71■□□□□ 0.11
CNN1-202ENST00000535659 PABPC3Q9H361 631 aaKnown RBP15.71■□□□□ 0.11
CNN1-202ENST00000535659 ITM2CQ9NQX7 267 aa15.71■□□□□ 0.11
CNN1-202ENST00000535659 EBF1Q9UH73 591 aa15.71■□□□□ 0.11
CNN1-202ENST00000535659 ASIC3Q9UHC3 531 aa15.71■□□□□ 0.11
CNN1-202ENST00000535659 CHKBQ9Y259 395 aa15.71■□□□□ 0.11
CNN1-202ENST00000535659 PCDHB9Q9Y5E1 797 aa15.71■□□□□ 0.11
CNN1-202ENST00000535659 CKAP5Q14008 2032 aa15.71■□□□□ 0.11
CNN1-202ENST00000535659 LOC285095A0A1B0GVY8 99 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 ERI2A8K979 691 aaKnown RBP15.7■□□□□ 0.1
CNN1-202ENST00000535659 PRR33A8MZF0 331 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 PGLSO95336 258 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 PDHA1P08559 390 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 TIMP2P16035 220 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 ITGB7P26010 798 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 IVDP26440 423 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 HOXA6P31267 233 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 LMAN1P49257 510 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 BASP1P80723 227 aaKnown RBP15.7■□□□□ 0.1
CNN1-202ENST00000535659 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 GLE1Q53GS7 698 aaKnown RBP15.7■□□□□ 0.1
CNN1-202ENST00000535659 CCDC70Q6NSX1 233 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 C8orf74Q6P047 294 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 RANBP10Q6VN20 620 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 TTC7BQ86TV6 843 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 CACUL1Q86Y37 369 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 HDDC3Q8N4P3 179 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 AADATQ8N5Z0 425 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 MDGA1Q8NFP4 955 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 IPMKQ8NFU5 416 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 FEM1CQ96JP0 617 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 TRIB3Q96RU7 358 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 OMDQ99983 421 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 ERP44Q9BS26 406 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 TRIM51Q9BSJ1 452 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 ADGRE3Q9BY15 652 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 HDAC8Q9BY41 377 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 PHTF1Q9UMS5 762 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 NCKAP1Q9Y2A7 1128 aa15.7■□□□□ 0.1
CNN1-202ENST00000535659 TSPAN11A1L157 253 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 AP2A1O95782 977 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 AGTP01019 485 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 APRTP07741 180 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 ADRA1AP35348 466 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 TNNT3P45378 269 aaPredicted RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 PXNP49023 591 aaPredicted RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 RPL26P61254 145 aaKnown RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 CNTN1Q12860 1018 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 SPARCL1Q14515 664 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 UGP2Q16851 508 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 TTC31Q49AM3 519 aaPredicted RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 SYCP2LQ5T4T6 812 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 FBXL19Q6PCT2 694 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 USP30Q70CQ3 517 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 ERN2Q76MJ5 926 aaKnown RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 ZSWIM9Q86XI8 627 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 NDUFAF2Q8N183 169 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 GANCQ8TET4 914 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 PIH1D2Q8WWB5 315 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 FSD1LQ9BXM9 530 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 LRRC40Q9H9A6 602 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 PRMT8Q9NR22 394 aaPredicted RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 FBXL12Q9NXK8 326 aa15.69■□□□□ 0.1
CNN1-202ENST00000535659 TPX2Q9ULW0 747 aaKnown RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 RPL26L1Q9UNX3 145 aaKnown RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 UTP11Q9Y3A2 253 aaKnown RBP15.69■□□□□ 0.1
CNN1-202ENST00000535659 EFCAB8A8MWE9 144 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 ANKRD66B4E2M5 251 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 PLK4O00444 970 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 RNASEH2AO75792 299 aaKnown RBP15.68■□□□□ 0.1
CNN1-202ENST00000535659 SUN1O94901 812 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 NDST3O95803 873 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 DRD3P35462 400 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 TPMTP51580 245 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 NEK3P51956 506 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 TERF1P54274 439 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 EPHB1P54762 984 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
CNN1-202ENST00000535659 PCGF5Q86SE9 256 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 KBTBD6Q86V97 674 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 MAML2Q8IZL2 1156 aaPredicted RBP15.68■□□□□ 0.1
CNN1-202ENST00000535659 CPT1BQ92523 772 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 RMDN1Q96DB5 314 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 FICDQ9BVA6 458 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 TRIM31Q9BZY9 425 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 RAB17Q9H0T7 212 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 NEUROG2Q9H2A3 272 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 PPIL1Q9Y3C6 166 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 A0A1W2PP55 124 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 DNALI1O14645 258 aaPredicted RBP15.68■□□□□ 0.1
CNN1-202ENST00000535659 USP12O75317 370 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 ZNF217O75362 1048 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 SLU7O95391 586 aaKnown RBP15.68■□□□□ 0.1
CNN1-202ENST00000535659 CPP00450 1065 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 ADRB3P13945 408 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 TPSB2P20231 275 aa15.68■□□□□ 0.1
CNN1-202ENST00000535659 XPAP23025 273 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms