RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 DNAJC28Q9NX36 388 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 FTSJ1Q9UET6 329 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 IPO11Q9UI26 975 aaKnown RBP9.73□□□□□ -0.85
SSBP3-215ENST00000533946 HPCAL4Q9UM19 191 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 DMTF1Q9Y222 760 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 PCDHGC4Q9Y5F7 938 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 ACACAQ13085 2346 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 A0A1W2PNU3 283 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 TRABD2BA6NFA1 517 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 NEMP1O14524 444 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 TRAFD1O14545 582 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 FGF10O15520 208 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 DAPK3O43293 454 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 MAFKO60675 156 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 PALMO75781 387 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 PIAS2O75928 621 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 RNF8O76064 485 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 LDOC1O95751 146 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 IGSF6O95976 241 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 FUCA1P04066 466 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 AKT2P31751 481 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 HNRNPH3P31942 346 aaKnown RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 PCK1P35558 622 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 LIG3P49916 1009 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 PFN3P60673 137 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 GBE1Q04446 702 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 TRAF2Q12933 501 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 TBX2Q13207 712 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 PDE1CQ14123 709 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 DPYSL3Q14195 570 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 UGP2Q16851 508 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 DEFB133Q30KQ1 61 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 ACBD5Q5T8D3 534 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 NEK5Q6P3R8 708 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 ZNF564Q8TBZ8 553 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 ZCCHC14Q8WYQ9 949 aaKnown RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 TSACCQ96A04 125 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 DNAJC7Q99615 494 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 LGR4Q9BXB1 951 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 BRD8Q9H0E9 1235 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 TSPY26PQ9H489 355 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 NOD2Q9HC29 1040 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 MRPL40Q9NQ50 206 aaKnown RBP9.72□□□□□ -0.85
SSBP3-215ENST00000533946 OR1A2Q9Y585 309 aa9.72□□□□□ -0.85
SSBP3-215ENST00000533946 URB1O60287 2271 aaKnown RBP9.71□□□□□ -0.85
SSBP3-215ENST00000533946 A0A0U1RQJ8 604 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 SPTY2D1-AS1A0A0U1RR47 76 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 TSPAN11A1L157 253 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 ARHGAP42A6NI28 874 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 PDHA1P08559 390 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 C6P13671 934 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CTPS1P17812 591 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CR2P20023 1033 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 SSR1P43307 286 aaKnown RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 HCAR3P49019 387 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 SCNN1BP51168 640 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 AIF1P55008 147 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CDH6P55285 790 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CYP4F3Q08477 520 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 TARDBPQ13148 414 aaKnown RBP eCLIP9.71□□□□□ -0.861e-6■■■□□ 15.9
SSBP3-215ENST00000533946 SUZ12Q15022 739 aaKnown RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 SMAD1Q15797 465 aaKnown RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 NCBP2-AS2Q69YL0 99 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 KIAA1161Q6NSJ0 714 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 NPNTQ6UXI9 565 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 KYAT3Q6YP21 454 aaKnown RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 TSPAN33Q86UF1 283 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 IQCHQ86VS3 1027 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 ZNF548Q8NEK5 533 aaPredicted RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 FAM71BQ8TC56 605 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 ECHDC3Q96DC8 303 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 PPP1R16AQ96I34 528 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 APOLD1Q96LR9 279 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CDC6Q99741 560 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CEP41Q9BYV8 373 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 CPEB1Q9BZB8 566 aaKnown RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 RBSNQ9H1K0 784 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 SP110Q9HB58 689 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 DKK3Q9UBP4 350 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 APOBEC2Q9Y235 224 aaKnown RBP9.71□□□□□ -0.86
SSBP3-215ENST00000533946 RAXQ9Y2V3 346 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 ST14Q9Y5Y6 855 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 HS3ST3A1Q9Y663 406 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 SCINQ9Y6U3 715 aa9.71□□□□□ -0.86
SSBP3-215ENST00000533946 RCCD1A6NED2 376 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 TMEM202A6NGA9 273 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ZSCAN5CA6NGD5 496 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 C3orf70A6NLC5 250 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-215ENST00000533946 A6NNZ2 444 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 H3BRJ5 948 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 TSPAN6O43657 245 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 PROSCO94903 275 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 PCCBP05166 539 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 ALPIP09923 528 aa9.7□□□□□ -0.86
SSBP3-215ENST00000533946 MYBL1P10243 752 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms