RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 FAM177A1Q8N128 213 aaPredicted RBP2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 LYG1Q8N1E2 194 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 SRBD1Q8N5C6 995 aaKnown RBP2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 CADM4Q8NFZ8 388 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 SCAMP5Q8TAC9 235 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 PARD3BQ8TEW8 1205 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 PRDM8Q9NQV8 689 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 ANKRD10Q9NXR5 420 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 C19orf53Q9UNZ5 99 aaPredicted RBP2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 KCNK7Q9Y2U2 307 aa2.71□□□□□ -1.98
ECHDC1-219ENST00000526299 ABCB4P21439 1286 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 MVDP53602 400 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 LMO4P61968 165 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 RELQ04864 619 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 SLC18A2Q05940 514 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 PDCLQ13371 301 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 PPIGQ13427 754 aaKnown RBP eCLIP2.7□□□□□ -1.988e-6■■■■□ 22.7
ECHDC1-219ENST00000526299 SPARCL1Q14515 664 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 ZNF484Q5JVG2 852 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 PAPPA-AS1Q5QFB9 102 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 ZC2HC1BQ5TFG8 222 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 FAM122CQ6P4D5 195 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 NFE4Q86UQ8 179 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 SLC44A2Q8IWA5 706 aaPredicted RBP2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 FSIP1Q8NA03 581 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 SPATA22Q8NHS9 363 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 FAM71BQ8TC56 605 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 LGALS12Q96DT0 336 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 EGFL8Q99944 293 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 KCND3Q9UK17 655 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 RALYQ9UKM9 306 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 PSAT1Q9Y617 370 aa2.7□□□□□ -1.98
ECHDC1-219ENST00000526299 PDS5AQ29RF7 1337 aaKnown RBP2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 CACNA1FO60840 1977 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 SOCS6O14544 535 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ACTL6BO94805 426 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ITGA2BP08514 1039 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 STX2P32856 288 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 CENPAP49450 140 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 KRTAP12-2P59991 146 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 AP2B1P63010 937 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 CHAF1AQ13111 956 aaPredicted RBP2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 PTK2BQ14289 1009 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 RPE65Q16518 533 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ZNF876PQ49A33 203 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 FBXO43Q4G163 708 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ATP13A5Q4VNC0 1218 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ARHGAP17Q68EM7 881 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 DGAT2L7PQ6IED9 249 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 CES5AQ6NT32 575 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 WDR73Q6P4I2 378 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 RINLQ6ZS11 566 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 RRAGAQ7L523 313 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 RASGRP2Q7LDG7 609 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 GTSCR1Q86UQ5 136 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 LURAP1LQ8IV03 231 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 SFTPA2Q8IWL1 248 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ODF3L1Q8IXM7 274 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 CNBD1Q8NA66 436 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ADAD2Q8NCV1 583 aaKnown RBP2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 SETD9Q8NE22 299 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 ZMIZ2Q8NF64 920 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 SLC24A4Q8NFF2 622 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 DEPTORQ8TB45 409 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 NCSTNQ92542 709 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 OBP2BQ9NPH6 170 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 SPATS2LQ9NUQ6 558 aaKnown RBP2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 NDUFAF4Q9P032 175 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 CDC14AQ9UNH5 594 aa2.69□□□□□ -1.98
ECHDC1-219ENST00000526299 TYW5A2RUC4 315 aaKnown RBP2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 DVL1O14640 695 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 ATP2C2O75185 946 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 SERPINC1P01008 464 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TUBBP07437 444 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 CD72P21854 359 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TTKP33981 857 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 GJC1P36383 396 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TECP42680 631 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TM4SF4P48230 202 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 CSRP3P50461 194 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 DVL1P1P54792 670 aaPredicted RBP2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 ARSFP54793 590 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TUBB4BP68371 445 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 STARD3Q14849 445 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 KRT72Q14CN4 511 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TTC22Q5TAA0 569 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 KLHL17Q6TDP4 642 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 LCTLQ6UWM7 567 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 CCNI2Q6ZMN8 369 aaPredicted RBP2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 C11orf96Q7Z7L8 435 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 FMNL3Q8IVF7 1028 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 FAM186BQ8IYM0 893 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 GHDCQ8N2G8 530 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 PJA1Q8NG27 643 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 OR10V1Q8NGI7 309 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 BBS10Q8TAM1 723 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 EID2BQ96D98 161 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TRAPPC9Q96Q05 1148 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 CSTL1Q9H114 145 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms