RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	KLRF2	D3W0D1	207 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	MASP2	O00187	686 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	IPO5	O00410	1097 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	EPB41L2	O43491	1005 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	NBN	O60934	754 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	TUBB4A	P04350	444 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CALM1	P0DP23	149 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CALM2	P0DP24	149 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CALM3	P0DP25	149 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CPA1	P15085	419 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	RXRA	P19793	462 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	KIF5B	P33176	963 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	HOXD12	P35452	270 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	LIFR	P42702	1097 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	GRK6	P43250	576 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	RGS19	P49795	217 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	AGTR2	P50052	363 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CDK7	P50613	346 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	FAM3B	P58499	235 aa	Predicted RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	C21orf58	P58505	322 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	RPL15	P61313	204 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	SF3A3	Q12874	501 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	KPNB1	Q14974	876 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	QRICH1	Q2TAL8	776 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	ANKRD40	Q6AI12	368 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	NFRKB	Q6P4R8	1299 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	ADGRF4	Q8IZF3	695 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	FAM133A	Q8N9E0	248 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	TRPV1	Q8NER1	839 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CTCFL	Q8NI51	663 aa	Predicted RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	TRAPPC12	Q8WVT3	735 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	DDB2	Q92466	427 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	P2RY11	Q96G91	374 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	REXO5	Q96IC2	774 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	DDX23	Q9BUQ8	820 aa	Known RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	GATA5	Q9BWX5	397 aa	Predicted RBP	5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	TMEM120A	Q9BXJ8	343 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	SEMA4C	Q9C0C4	833 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	NUAK2	Q9H093	628 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	VPS16	Q9H269	839 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CCDC134	Q9H6E4	229 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	JMJD4	Q9H9V9	463 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	CYP39A1	Q9NYL5	469 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	MAFF	Q9ULX9	164 aa		5.78	□□□□□ -1.48
MATR3-218	ENST00000511978	ASTN1	O14525	1302 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	SLC38A8	A6NNN8	435 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	TTC34	A8MYJ7	566 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	RRH	O14718	337 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ZBTB5	O15062	677 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	PLEKHA8P1	O95397	391 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	LARGE1	O95461	756 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	SGPL1	O95470	568 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	TFRC	P02786	760 aa	Known RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CELA2A	P08217	269 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CAST	P20810	708 aa	Known RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CALML3	P27482	149 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CERS1	P27544	350 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	SLC8A1	P32418	973 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	STAT6	P42226	847 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ZNF84	P51523	738 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	FOXL2	P58012	376 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CNTN2	Q02246	1040 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	PFKFB3	Q16875	520 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	COLEC12	Q5KU26	742 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	BLOC1S2	Q6QNY1	142 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ARMCX2	Q7L311	632 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	RAB11FIP2	Q7L804	512 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	TFAP2D	Q7Z6R9	452 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	TMTC2	Q8N394	836 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	GALNT16	Q8N428	558 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ASB12	Q8WXK4	309 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ZNF845	Q96IR2	970 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	PIGS	Q96S52	555 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	VAT1L	Q9HCJ6	419 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	PDGFC	Q9NRA1	345 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ASNSD1	Q9NWL6	643 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	NRBP1	Q9UHY1	535 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	CNPY2	Q9Y2B0	182 aa		5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5.77	□□□□□ -1.49
MATR3-218	ENST00000511978	MCM3AP	O60318	1980 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	SMCHD1	A6NHR9	2005 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	KLF18	A0A0U1RQI7	1052 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	ASB14	A6NK59	587 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	EFCAB8	A8MWE9	144 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	PPP6C	O00743	305 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	SEPT4	O43236	478 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	ZBTB43	O43298	467 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	TPD52L2	O43399	206 aa	Known RBP	5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	CYTH3	O43739	400 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	RNF8	O76064	485 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	KAT7	O95251	611 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	SNAI1	O95863	264 aa	Predicted RBP	5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	CYP3A4	P08684	503 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	AKR1A1	P14550	325 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	RPS6KB1	P23443	525 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	PSMA5	P28066	241 aa		5.76	□□□□□ -1.49
MATR3-218	ENST00000511978	MPG	P29372	298 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms