RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SUV39H2Q9H5I1 410 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 ZWILCHQ9H900 591 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 PCDH12Q9NPG4 1184 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 DKK3Q9UBP4 350 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 CAPN11Q9UMQ6 739 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 RAXQ9Y2V3 346 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 PCDHGA1Q9Y5H4 931 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 U3KQA8 63 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 COL5A1P20908 1838 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-219ENST00000494069 CHD6Q8TD26 2715 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 KNTC1P50748 2209 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 DSPP15924 2871 aaKnown RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SPTY2D1-AS1A0A0U1RR47 76 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 A0A1W2PQJ5 194 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 ARHGAP42A6NI28 874 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 K7ESM1 405 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 FPGTO14772 594 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SCAMP1O15126 338 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 CASC3O15234 703 aaKnown RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 PALMO75781 387 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 TM7SF2O76062 418 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 CSF2P04141 144 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SERPING1P05155 500 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 RARAP10276 462 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 JUPP14923 745 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 DESP17661 470 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 HTR7P34969 479 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 PCK1P35558 622 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 RABIFP47224 123 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 ZBED6P86452 979 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 INSM1Q01101 510 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 RAD51Q06609 339 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SLC10A7Q0GE19 358 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 TARDBPQ13148 414 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 ZNF211Q13398 564 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 C1orf61Q13536 156 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 IRF4Q15306 451 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 NFKBIBQ15653 356 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 WSCD2Q2TBF2 565 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 TMEM52BQ4KMG9 183 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 HES3Q5TGS1 186 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 C19orf48Q6RUI8 117 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 POLNQ7Z5Q5 900 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SRLQ86TD4 932 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 TMPRSS12Q86WS5 348 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 RBFAQ8N0V3 343 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 TP53I13Q8NBR0 393 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 ZNF548Q8NEK5 533 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 OR4C6Q8NH72 309 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 CXorf40AQ8TE69 158 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 ASB12Q8WXK4 309 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 FUBP1Q96AE4 644 aaKnown RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 NCAPGQ9BPX3 1015 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 CPEB1Q9BZB8 566 aaKnown RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SP110Q9HB58 689 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 MRPL47Q9HD33 250 aaKnown RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 IPO11Q9UI26 975 aaKnown RBP8.62□□□□□ -1.03
LRCH3-219ENST00000494069 SCINQ9Y6U3 715 aa8.62□□□□□ -1.03
LRCH3-219ENST00000494069 PKD1L2Q7Z442 2459 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 TSPAN11A1L157 253 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 A8MX80 341 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 GOLGA6L19H0YKK7 550 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 GCATO75600 419 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PEX11BO96011 259 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 CYP1A2P05177 515 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 CELA2BP08218 269 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 CD48P09326 243 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 C1SP09871 688 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 MYBL1P10243 752 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 C6P13671 934 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 NME1P15531 152 aaKnown RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 JUNDP17535 347 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 XPAP23025 273 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 IL4RP24394 825 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 ACP1P24666 158 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 CASP14P31944 242 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 HCAR3P49019 387 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 TPM4P67936 248 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 DAB2P98082 770 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 SLC25A11Q02978 314 aaKnown RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 IL10RBQ08334 325 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PTPRRQ15256 657 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 TCEA2Q15560 299 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 DPYSL2Q16555 572 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 UGP2Q16851 508 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 DEFB133Q30KQ1 61 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 ATP13A4Q4VNC1 1196 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 CCDC122Q5T0U0 273 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 KCTD16Q68DU8 428 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PARGQ86W56 976 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 DCP2Q8IU60 420 aaKnown RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PSTKQ8IV42 348 aaKnown RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 PGBD5Q8N414 524 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 LMX1AQ8TE12 382 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 SYN2Q92777 582 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-219ENST00000494069 TRIM11Q96F44 468 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 IFT43Q96FT9 208 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 APOLD1Q96LR9 279 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 CSPG4P5Q96PW8 444 aa8.61□□□□□ -1.03
LRCH3-219ENST00000494069 NUP85Q9BW27 656 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms